Gene
| Gene Model ID | pfu_aug2.0_121.1_03674 |
|---|---|
| Locus | scaffold121.1 : 486146 ... 496912 : - |
| To GenomeBrowser | scaffold121.1:486146..496912 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | pfu_aug1.0_3002.1_59103 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_121.1_03674.t1 | 2 | 1 | TIP49 | 229 | 292 | 4.3e-07 | 29.0 | 3.8e-05 | 0.017 | 13.8 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 1 | RuvB_N | 233 | 307 | 2.3e-12 | 46.5 | 1.1e-07 | 4.8e-05 | 22.5 |
| pfu_aug2.0_121.1_03674.t1 | 5 | 1 | AAA_16 | 234 | 266 | 5.1e-11 | 42.8 | 7.9e-06 | 0.0035 | 17.3 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 1 | AAA_19 | 234 | 256 | 1.2e-06 | 28.1 | 2.1e-06 | 0.00095 | 18.8 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 1 | AAA | 237 | 368 | 0.0 | 249.6 | 6.1e-37 | 2.7e-34 | 118.1 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 1 | AAA_5 | 237 | 307 | 5.1e-10 | 39.2 | 3.4e-05 | 0.015 | 14.9 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 1 | AAA_2 | 237 | 321 | 2.3e-08 | 34.1 | 6.4e-05 | 0.029 | 14.2 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 1 | AAA_14 | 237 | 308 | 1.7e-06 | 27.9 | 3.3e-05 | 0.015 | 15.2 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 1 | AAA_22 | 237 | 293 | 2.5e-06 | 27.6 | 0.00021 | 0.096 | 12.8 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 1 | NTPase_1 | 237 | 267 | 6.2e-06 | 26.0 | 0.0004 | 0.18 | 11.5 |
| pfu_aug2.0_121.1_03674.t1 | 5 | 2 | AAA_16 | 275 | 315 | 5.1e-11 | 42.8 | 0.12 | 52.0 | 3.7 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 2 | NTPase_1 | 282 | 305 | 6.2e-06 | 26.0 | 5.5 | 2500.0 | -2.0 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 2 | RuvB_N | 341 | 381 | 2.3e-12 | 46.5 | 0.65 | 290.0 | 0.3 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 3 | RuvB_N | 453 | 567 | 2.3e-12 | 46.5 | 1.7e-06 | 0.00074 | 18.6 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 2 | TIP49 | 498 | 554 | 4.3e-07 | 29.0 | 8.2e-05 | 0.037 | 12.7 |
| pfu_aug2.0_121.1_03674.t1 | 5 | 3 | AAA_16 | 499 | 532 | 5.1e-11 | 42.8 | 1.9e-05 | 0.0084 | 16.1 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 2 | AAA_5 | 501 | 568 | 5.1e-10 | 39.2 | 2.0e-05 | 0.0088 | 15.7 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 2 | AAA | 502 | 667 | 0.0 | 249.6 | 3.0e-40 | 1.3e-37 | 128.9 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 2 | AAA_19 | 502 | 531 | 1.2e-06 | 28.1 | 0.0058 | 2.6 | 7.8 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 2 | AAA_14 | 502 | 570 | 1.7e-06 | 27.9 | 0.0015 | 0.69 | 9.8 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 2 | AAA_22 | 502 | 523 | 2.5e-06 | 27.6 | 0.013 | 5.9 | 7.0 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 3 | NTPase_1 | 502 | 532 | 6.2e-06 | 26.0 | 0.00075 | 0.34 | 10.6 |
| pfu_aug2.0_121.1_03674.t1 | 2 | 2 | AAA_2 | 503 | 645 | 2.3e-08 | 34.1 | 1.1e-05 | 0.0049 | 16.8 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 4 | NTPase_1 | 536 | 567 | 6.2e-06 | 26.0 | 1.0 | 450.0 | 0.4 |
| pfu_aug2.0_121.1_03674.t1 | 5 | 4 | AAA_16 | 553 | 583 | 5.1e-11 | 42.8 | 1.9 | 850.0 | -0.3 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 3 | AAA_5 | 618 | 654 | 5.1e-10 | 39.2 | 0.24 | 110.0 | 2.5 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 3 | AAA_19 | 630 | 646 | 1.2e-06 | 28.1 | 0.64 | 290.0 | 1.3 |
| pfu_aug2.0_121.1_03674.t1 | 4 | 4 | RuvB_N | 636 | 654 | 2.3e-12 | 46.5 | 8.6 | 3900.0 | -3.4 |
| pfu_aug2.0_121.1_03674.t1 | 3 | 3 | AAA_22 | 662 | 723 | 2.5e-06 | 27.6 | 3.3 | 1500.0 | -0.8 |
| pfu_aug2.0_121.1_03674.t1 | 5 | 5 | AAA_16 | 697 | 737 | 5.1e-11 | 42.8 | 6.1 | 2700.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_121.1_03674.t1 | gi|260821714|ref|XP_002606248.1| | hypothetical protein BRAFLDRAFT_84010 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_121.1_03674.t1 | gi|260791609|ref|XP_002590821.1| | hypothetical protein BRAFLDRAFT_90046 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_121.1_03674.t1 | gi|637355123|ref|XP_008119070.1| | PREDICTED: LOW QUALITY PROTEIN: spermatogenesis-associated protein 5-like protein 1 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_121.1_03674.t1 | gi|542251022|ref|XP_005461634.1| | PREDICTED: spermatogenesis-associated protein 5-like protein 1-like isoform X2 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_121.1_03674.t1 | gi|542251020|ref|XP_005461633.1| | PREDICTED: spermatogenesis-associated protein 5-like protein 1-like isoform X1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_121.1_03674.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03674.t1 atggatgtcaagccaattcaacaagtgacagttaaggagattacaggatcgggacatcaaaaatgttacctcaatgttga tgtgatgaaggtctacagtattaaagtggcatcatttgtctgtctgagaatggacaacagagagtacatatgccaagtct ggccacagtcaacagtgacggaacacatgataaagtatagtcctaatgtgtacagaaaacagacttcgcatcctaaaaca agcagctataatagtatatgtaatttgaaacttttaagaaccttcgaagcagagattataaatgtctctctcattgtatc ctccatagaaaaattaagtaatgttcgtagaaatttccaatggaatccatcaggaattgagaatatgtgtaaaaatttga tgtacaagttgtgtgtatctcaaggatataccattgatctagaagaattggatttagcaaaactatatggtgtaagcttt atagaggtaagttcttgtaataatgacggttttgttattgttactcagaaaactaaaatatatattgaagatatcaagtg caaagaacaatttgaacagttaaatagtgtggaatatgaaagtaatcttgttggtggattggactctgtgataaaagagc tagaagatatgattatgacctctataagtatttccaaaaccatgcgtcattttcgtttaccaaaaggaatactcttgagg ggtccacctggtactggaaaaacttcagttgtaaatgttgttgctagaaaatgtaaagcatatcttataacaattaatgg acctgaagtgtttggagcaagacctggtgatacagaagagaacatgcggcatatttttgaaaaagccttaacgattagca aagagggacgttgtgtgctattcatagatgaaattgatgcaatatgcccaagaagatggaaatctggagatgcacaggag agcagggccaccagcttaatgttgtcattttttgacagaattgcatcatgtgacggtataatcatcattggagcgacaaa tcgtccaggagaaatggatccagccctacgcagaccgggacggtttgataaagagattatggttaactttccatcacaca gccagcgcactgaaattttgagagtgcacactttgaaatttgacacttttggtgaccttgaccttgacagaattgcagcc ttgacaaatggatatgtaggggcagacttggcagccgtttgtaatgaggcagcatacatcgctctgatgaatcatacagg ccaacagttaccaaagatagagacagatcactttttgactgctgttaagaaggtgcagccatcggtacagaagggcggtg acatcacaatggaccttagaccagtggcctgggaagatatcggtggactacagcttgttaaactgaagcttcaacaggcg gtggagtggcctattgttcaccctgaggcttttgagaggatgggattaccttgtcccaaaggtgtactactatatggtcc cccaggttgctgtaagactacacttgttagagcggcagccaccacatgtggtgccacattcctggctgtcagcggtgctc agctgtattctccattcattggtgattcagagaaaattatcacagaggttttccatagagcaagagctggtgccccatct ataatattcctagatgaagtagattccattgttggtaaaaggggagactctacaagccaaaggagtgttcaagagagagt actgtccacccttttgaatgaaatggatggagttggaattagactagatgaaaagagagattcatcaaacttgaacaaag tgcccgagggtcatactccagagtcaaacacagtacaagttgttgaaaggtcagaggtcagtaataggaacatcctggta gtggcagccactaatcgtccagacatgctggacgaggcactgaccaggccgggaagattggataagattatttatgtccc accacctgatacagagggacggaagcaaatattgagtgtgctaacacaaggcatgcagcttgatggagtcagtctgactg acattgctgactctactgcatattacactggagcagatctacagaatctctgcaaggaggctgccttgactgctctaaca gagaatttagaagctacacatgtgactatggatcactttgatcaggctatgacaatgtgcaaaccatcattgactttaaa actcctagattattatgaaaatctatcatcaaaaggacaagctccagtgaaatag |
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Protein
| Protein ID | pfu_aug2.0_121.1_03674.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03674.t1 MDVKPIQQVTVKEITGSGHQKCYLNVDVMKVYSIKVASFVCLRMDNREYICQVWPQSTVTEHMIKYSPNVYRKQTSHPKT SSYNSICNLKLLRTFEAEIINVSLIVSSIEKLSNVRRNFQWNPSGIENMCKNLMYKLCVSQGYTIDLEELDLAKLYGVSF IEVSSCNNDGFVIVTQKTKIYIEDIKCKEQFEQLNSVEYESNLVGGLDSVIKELEDMIMTSISISKTMRHFRLPKGILLR GPPGTGKTSVVNVVARKCKAYLITINGPEVFGARPGDTEENMRHIFEKALTISKEGRCVLFIDEIDAICPRRWKSGDAQE SRATSLMLSFFDRIASCDGIIIIGATNRPGEMDPALRRPGRFDKEIMVNFPSHSQRTEILRVHTLKFDTFGDLDLDRIAA LTNGYVGADLAAVCNEAAYIALMNHTGQQLPKIETDHFLTAVKKVQPSVQKGGDITMDLRPVAWEDIGGLQLVKLKLQQA VEWPIVHPEAFERMGLPCPKGVLLYGPPGCCKTTLVRAAATTCGATFLAVSGAQLYSPFIGDSEKIITEVFHRARAGAPS IIFLDEVDSIVGKRGDSTSQRSVQERVLSTLLNEMDGVGIRLDEKRDSSNLNKVPEGHTPESNTVQVVERSEVSNRNILV VAATNRPDMLDEALTRPGRLDKIIYVPPPDTEGRKQILSVLTQGMQLDGVSLTDIADSTAYYTGADLQNLCKEAALTALT ENLEATHVTMDHFDQAMTMCKPSLTLKLLDYYENLSSKGQAPVK |
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