Gene
Gene Model ID | pfu_aug2.0_1210.1_01476 |
---|---|
Locus | scaffold1210.1 : 61346 ... 68991 : + |
To GenomeBrowser | scaffold1210.1:61346..68991 |
Genes list of scaffold | scaffold1210.1 |
Synonym | pfu_aug1.0_15541.1_10825 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
caveolin-1-like | GO:0005794 GO:0005886 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1210.1_01476.t1 | 1 | 1 | Caveolin | 4 | 125 | 5.60519e-45 | 152.6 | 0.0 | 5.60519e-45 | 152.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1210.1_01476.t1 | gi|524908900|ref|XP_005109539.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
pfu_aug2.0_1210.1_01476.t1 | gi|524908898|ref|XP_005109538.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
pfu_aug2.0_1210.1_01476.t1 | gi|524908881|ref|XP_005109530.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
pfu_aug2.0_1210.1_01476.t1 | gi|524908883|ref|XP_005109531.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
pfu_aug2.0_1210.1_01476.t1 | gi|676426844|ref|XP_009044754.1| | hypothetical protein LOTGIDRAFT_198586 [Lottia gigantea] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_1210.1_01476.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1210.1_01476.t1 atggacgctgtagatttagtaaatagagatccaaacaatatcaacgaccatctgaaggttgcgtttgaagacatcatagc agaacctgatggcattaagagcttggactgtgtatggtcatgttcctacagatgttttacatgctggaagcagtgtacct acatgatcatgaccaccttgtttggctgctgtatagccgctgagtggggtatagagttcgcttacgtggcattttggcac atctggtacgtcactccttgcttcaaaatgttggaaatcaactgcggctgctgcaagaagctttacggattatgtgtaca ttgttgtctggatccactctttgaggcttgtggtttgatgttcaccgcattcaaacgaagtggatga |
Protein
Protein ID | pfu_aug2.0_1210.1_01476.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1210.1_01476.t1 MDAVDLVNRDPNNINDHLKVAFEDIIAEPDGIKSLDCVWSCSYRCFTCWKQCTYMIMTTLFGCCIAAEWGIEFAYVAFWH IWYVTPCFKMLEINCGCCKKLYGLCVHCCLDPLFEACGLMFTAFKRSG |