Gene
| Gene Model ID | pfu_aug2.0_1210.1_01476 |
|---|---|
| Locus | scaffold1210.1 : 61346 ... 68991 : + |
| To GenomeBrowser | scaffold1210.1:61346..68991 |
| Genes list of scaffold | scaffold1210.1 |
| Synonym | pfu_aug1.0_15541.1_10825 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| caveolin-1-like | GO:0005794 GO:0005886 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1210.1_01476.t1 | 1 | 1 | Caveolin | 4 | 125 | 5.60519e-45 | 152.6 | 0.0 | 5.60519e-45 | 152.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1210.1_01476.t1 | gi|524908900|ref|XP_005109539.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1210.1_01476.t1 | gi|524908898|ref|XP_005109538.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1210.1_01476.t1 | gi|524908881|ref|XP_005109530.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1210.1_01476.t1 | gi|524908883|ref|XP_005109531.1| | PREDICTED: caveolin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1210.1_01476.t1 | gi|676426844|ref|XP_009044754.1| | hypothetical protein LOTGIDRAFT_198586 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1210.1_01476.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1210.1_01476.t1 atggacgctgtagatttagtaaatagagatccaaacaatatcaacgaccatctgaaggttgcgtttgaagacatcatagc agaacctgatggcattaagagcttggactgtgtatggtcatgttcctacagatgttttacatgctggaagcagtgtacct acatgatcatgaccaccttgtttggctgctgtatagccgctgagtggggtatagagttcgcttacgtggcattttggcac atctggtacgtcactccttgcttcaaaatgttggaaatcaactgcggctgctgcaagaagctttacggattatgtgtaca ttgttgtctggatccactctttgaggcttgtggtttgatgttcaccgcattcaaacgaagtggatga |
|
Protein
| Protein ID | pfu_aug2.0_1210.1_01476.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1210.1_01476.t1 MDAVDLVNRDPNNINDHLKVAFEDIIAEPDGIKSLDCVWSCSYRCFTCWKQCTYMIMTTLFGCCIAAEWGIEFAYVAFWH IWYVTPCFKMLEINCGCCKKLYGLCVHCCLDPLFEACGLMFTAFKRSG |
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