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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1210.1_01478
Locus scaffold1210.1 : 110664 ... 144195 : -
To GenomeBrowser scaffold1210.1:110664..144195
Genes list of scaffold scaffold1210.1
Synonym pfu_aug1.0_2016.1_58741

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1210.1_01478.t1 1 1 Fork_head 704 779 1.5e-25 89.0 2.8e-29 4.2e-25 87.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1210.1_01478.t1 gi|340723397|ref|XP_003400076.1| 0.0
pfu_aug2.0_1210.1_01478.t1 gi|157279729|ref|NP_001098419.1| FoxP protein [Apis mellifera] 0.0
pfu_aug2.0_1210.1_01478.t1 gi|571567364|ref|XP_006560350.1| PREDICTED: FoxP protein isoform X13 [Apis mellifera] 0.0
pfu_aug2.0_1210.1_01478.t1 gi|571567352|ref|XP_006560347.1| PREDICTED: FoxP protein isoform X10 [Apis mellifera] 0.0
pfu_aug2.0_1210.1_01478.t1 gi|571567337|ref|XP_006560343.1| PREDICTED: FoxP protein isoform X6 [Apis mellifera] 0.0

Transcript
Transcript IDpfu_aug2.0_1210.1_01478.t1
Definition-
>pfu_aug2.0_1210.1_01478.t1
atgagcatattggtaggacggagtaatcctgaaatagacgtgatgaacaggtatgaaatgagcagatttgactccaggga
catatcgcctttctactcatccttccctccgccattcttcttgcgaactccaccgaacggagtatacgacggacgaatgg
acctcatggaacacagtgtatggaaagacaggaaggacgatccaaaaatgtttccaaagtatcacccggaattctcacac
aaacttctccatcataatggcatctcagatttatatgacagagaaagaaagttatatgacgttaatcacaaaggggatgt
gaggaatcggagggatttaacagaaaagaaaggttcctcctacccaggggcgatgttagaacttgatgtcaccagccctc
atgtgaggaattccgtcaaagaacagtcccctataagtccttctgagtacttctatcgtcgacgagatatccttagtaac
agtggaagctcacattctactagtccggtatcacccttctcaccggaacaatcatgcgggaaactgaagtacccctcttc
tagaaatctgagtggtcccccttccccaccgcggagtcatggaataatggagcggagtgaagctggtgttataaacttgt
ccacgacaaaagatgtagtaacagaacatatgatgaacggagaaatatcacagaatggtgacctggagagtgcacaggat
gtagctccttcgtctccaaatggttccaaagtgccccctacaaatgaaacttctcctggagcgccctctaacggcgtggc
ggctaagagaaaaacaaaatgtaacagtgctgttgagctagggagtccgccccagccactgatgatgatggcggctcagc
aagggctattacagcagcatgtacaacaaatgatgcaggggcagggtctgaccacaccccagatacagcagcttttacag
catcaaaccatgcttcaacatcagcaacaacagaagcttcatgaacaaatgttacaggagttaaatgagcagttacagat
gaacgtcatccaacaatcgcagctcatgcagcaacaagataagtcaaagggcagcaaagcacagcagcaactccagcaac
tctccgtacaacaacaacaactcatacaacaaatacaacagatccagctacaacagaggcagtacttactggcctgtctt
gtctcccctttcggaatgcaacaagggatgatgctgcatcctgagttacagcagctttggaaggaggtggcgtctcagtc
aggggcggatccagagaacggcgtgaaaggcggctttaacggactgggtagtactgtatccacccccagtacccaggcac
cctccgcatggaccaacgggcttaactctaattatcttcctgccgggttaattggtcagccgccagtagctgttgacgta
gacaacgctgagaggaagaacgccatcctttttagacacggtgtgtgtaaatggcccggatgtgacacaccatgtgaaga
ccaggcagctttccacaaacatttgaatattgaacatcagctagatgacaggagcactgcgcaggcgcgagtacagatgc
aggttgttagtcagttggagatccagctgacgagggaacgtgatctcttacaaggcatgatgctccatcttcacatgaag
aaacctgcagatcctaccttggacacgtccactgctcagaaattggtttcccagaaaatgtcatctcctgtatcacctgt
ttccatgacaactcttcattcagctccttccagtccgcccaaaccagcctccataatttccagtccactgaagttgcagc
caagcatgactaccatatcgtctgtctcagcccctcccacccccgtggccttggtgtctaaccccatgtctctgcccctg
gggattgccccacccccgtccatgtctaagcccccaacccccctgtcccaggcctcccagccagccacgcctactggagg
aggaggtcctatgaggaggagggtatctgacaagtctaacttgcctatatcctctggtacctctgaagaaatccaaagaa
atagagacttctacaaaagtacagatgttaggccaccttttacctatgcttctctcattagacaggcaatcatagaatct
cctcacaagcagctgactttgaatgaaatctatcaatggtttcagtcaacatttgcttacttcagacgaaatgaagccac
ttggaagaatgcagtgcggcacaacctaagccttcacaaatgttttatgagagttgagaatgttaaaggagcggtttgga
ctgtcgatgaggtagaattctacaaaaggcgtccccaaaaattaggcgggaacatgcccatcaaggatgtaaagagtcct
atgatccctgacccaatgtttggagaaaatcttaacgccagtctgagggcggcgttagagcaggccaacttgctgaatca
tcattatagtaacggtaccgttcccatggatggtgtggaggacctgtctatgaagtccaataggaccagcagctcggact
atcataaggacacttcaccttctcaggatggttacccagatgtcaaagatgaggcaagctacgaggaggaggaggcattc
ctcaggaatggtcaaatggcagttaccatggaaatgaggacaacgccacctagtgacagtgttgtcctcaacctacaatc
ctcttctctagattgcgttgttaaggaggaagcttctgaagacggtcaacaggtgtttagtgagaatattgcggcagaaa
gagcagttgtcttacagcagtcaccgaatgaacattacttacgaacggaggaacaatatataacggaggaaaggcccaat
tctcacgacgagggaaggatctcacctgatcaggggaggatctcaccaaatcaggggcggttgtctcccagtcaggatat
gtacctatccatcaataagcagggagagcctggtatatcatgtatacctgaggccttgagttcctga

Protein
Protein IDpfu_aug2.0_1210.1_01478.t1
Definition-
>pfu_aug2.0_1210.1_01478.t1
MSILVGRSNPEIDVMNRYEMSRFDSRDISPFYSSFPPPFFLRTPPNGVYDGRMDLMEHSVWKDRKDDPKMFPKYHPEFSH
KLLHHNGISDLYDRERKLYDVNHKGDVRNRRDLTEKKGSSYPGAMLELDVTSPHVRNSVKEQSPISPSEYFYRRRDILSN
SGSSHSTSPVSPFSPEQSCGKLKYPSSRNLSGPPSPPRSHGIMERSEAGVINLSTTKDVVTEHMMNGEISQNGDLESAQD
VAPSSPNGSKVPPTNETSPGAPSNGVAAKRKTKCNSAVELGSPPQPLMMMAAQQGLLQQHVQQMMQGQGLTTPQIQQLLQ
HQTMLQHQQQQKLHEQMLQELNEQLQMNVIQQSQLMQQQDKSKGSKAQQQLQQLSVQQQQLIQQIQQIQLQQRQYLLACL
VSPFGMQQGMMLHPELQQLWKEVASQSGADPENGVKGGFNGLGSTVSTPSTQAPSAWTNGLNSNYLPAGLIGQPPVAVDV
DNAERKNAILFRHGVCKWPGCDTPCEDQAAFHKHLNIEHQLDDRSTAQARVQMQVVSQLEIQLTRERDLLQGMMLHLHMK
KPADPTLDTSTAQKLVSQKMSSPVSPVSMTTLHSAPSSPPKPASIISSPLKLQPSMTTISSVSAPPTPVALVSNPMSLPL
GIAPPPSMSKPPTPLSQASQPATPTGGGGPMRRRVSDKSNLPISSGTSEEIQRNRDFYKSTDVRPPFTYASLIRQAIIES
PHKQLTLNEIYQWFQSTFAYFRRNEATWKNAVRHNLSLHKCFMRVENVKGAVWTVDEVEFYKRRPQKLGGNMPIKDVKSP
MIPDPMFGENLNASLRAALEQANLLNHHYSNGTVPMDGVEDLSMKSNRTSSSDYHKDTSPSQDGYPDVKDEASYEEEEAF
LRNGQMAVTMEMRTTPPSDSVVLNLQSSSLDCVVKEEASEDGQQVFSENIAAERAVVLQQSPNEHYLRTEEQYITEERPN
SHDEGRISPDQGRISPNQGRLSPSQDMYLSINKQGEPGISCIPEALSS

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