Gene
| Gene Model ID | pfu_aug2.0_1210.1_01478 |
|---|---|
| Locus | scaffold1210.1 : 110664 ... 144195 : - |
| To GenomeBrowser | scaffold1210.1:110664..144195 |
| Genes list of scaffold | scaffold1210.1 |
| Synonym | pfu_aug1.0_2016.1_58741 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1210.1_01478.t1 | 1 | 1 | Fork_head | 704 | 779 | 1.5e-25 | 89.0 | 2.8e-29 | 4.2e-25 | 87.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1210.1_01478.t1 | gi|340723397|ref|XP_003400076.1| | 0.0 | |
| pfu_aug2.0_1210.1_01478.t1 | gi|157279729|ref|NP_001098419.1| | FoxP protein [Apis mellifera] | 0.0 |
| pfu_aug2.0_1210.1_01478.t1 | gi|571567364|ref|XP_006560350.1| | PREDICTED: FoxP protein isoform X13 [Apis mellifera] | 0.0 |
| pfu_aug2.0_1210.1_01478.t1 | gi|571567352|ref|XP_006560347.1| | PREDICTED: FoxP protein isoform X10 [Apis mellifera] | 0.0 |
| pfu_aug2.0_1210.1_01478.t1 | gi|571567337|ref|XP_006560343.1| | PREDICTED: FoxP protein isoform X6 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1210.1_01478.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1210.1_01478.t1 atgagcatattggtaggacggagtaatcctgaaatagacgtgatgaacaggtatgaaatgagcagatttgactccaggga catatcgcctttctactcatccttccctccgccattcttcttgcgaactccaccgaacggagtatacgacggacgaatgg acctcatggaacacagtgtatggaaagacaggaaggacgatccaaaaatgtttccaaagtatcacccggaattctcacac aaacttctccatcataatggcatctcagatttatatgacagagaaagaaagttatatgacgttaatcacaaaggggatgt gaggaatcggagggatttaacagaaaagaaaggttcctcctacccaggggcgatgttagaacttgatgtcaccagccctc atgtgaggaattccgtcaaagaacagtcccctataagtccttctgagtacttctatcgtcgacgagatatccttagtaac agtggaagctcacattctactagtccggtatcacccttctcaccggaacaatcatgcgggaaactgaagtacccctcttc tagaaatctgagtggtcccccttccccaccgcggagtcatggaataatggagcggagtgaagctggtgttataaacttgt ccacgacaaaagatgtagtaacagaacatatgatgaacggagaaatatcacagaatggtgacctggagagtgcacaggat gtagctccttcgtctccaaatggttccaaagtgccccctacaaatgaaacttctcctggagcgccctctaacggcgtggc ggctaagagaaaaacaaaatgtaacagtgctgttgagctagggagtccgccccagccactgatgatgatggcggctcagc aagggctattacagcagcatgtacaacaaatgatgcaggggcagggtctgaccacaccccagatacagcagcttttacag catcaaaccatgcttcaacatcagcaacaacagaagcttcatgaacaaatgttacaggagttaaatgagcagttacagat gaacgtcatccaacaatcgcagctcatgcagcaacaagataagtcaaagggcagcaaagcacagcagcaactccagcaac tctccgtacaacaacaacaactcatacaacaaatacaacagatccagctacaacagaggcagtacttactggcctgtctt gtctcccctttcggaatgcaacaagggatgatgctgcatcctgagttacagcagctttggaaggaggtggcgtctcagtc aggggcggatccagagaacggcgtgaaaggcggctttaacggactgggtagtactgtatccacccccagtacccaggcac cctccgcatggaccaacgggcttaactctaattatcttcctgccgggttaattggtcagccgccagtagctgttgacgta gacaacgctgagaggaagaacgccatcctttttagacacggtgtgtgtaaatggcccggatgtgacacaccatgtgaaga ccaggcagctttccacaaacatttgaatattgaacatcagctagatgacaggagcactgcgcaggcgcgagtacagatgc aggttgttagtcagttggagatccagctgacgagggaacgtgatctcttacaaggcatgatgctccatcttcacatgaag aaacctgcagatcctaccttggacacgtccactgctcagaaattggtttcccagaaaatgtcatctcctgtatcacctgt ttccatgacaactcttcattcagctccttccagtccgcccaaaccagcctccataatttccagtccactgaagttgcagc caagcatgactaccatatcgtctgtctcagcccctcccacccccgtggccttggtgtctaaccccatgtctctgcccctg gggattgccccacccccgtccatgtctaagcccccaacccccctgtcccaggcctcccagccagccacgcctactggagg aggaggtcctatgaggaggagggtatctgacaagtctaacttgcctatatcctctggtacctctgaagaaatccaaagaa atagagacttctacaaaagtacagatgttaggccaccttttacctatgcttctctcattagacaggcaatcatagaatct cctcacaagcagctgactttgaatgaaatctatcaatggtttcagtcaacatttgcttacttcagacgaaatgaagccac ttggaagaatgcagtgcggcacaacctaagccttcacaaatgttttatgagagttgagaatgttaaaggagcggtttgga ctgtcgatgaggtagaattctacaaaaggcgtccccaaaaattaggcgggaacatgcccatcaaggatgtaaagagtcct atgatccctgacccaatgtttggagaaaatcttaacgccagtctgagggcggcgttagagcaggccaacttgctgaatca tcattatagtaacggtaccgttcccatggatggtgtggaggacctgtctatgaagtccaataggaccagcagctcggact atcataaggacacttcaccttctcaggatggttacccagatgtcaaagatgaggcaagctacgaggaggaggaggcattc ctcaggaatggtcaaatggcagttaccatggaaatgaggacaacgccacctagtgacagtgttgtcctcaacctacaatc ctcttctctagattgcgttgttaaggaggaagcttctgaagacggtcaacaggtgtttagtgagaatattgcggcagaaa gagcagttgtcttacagcagtcaccgaatgaacattacttacgaacggaggaacaatatataacggaggaaaggcccaat tctcacgacgagggaaggatctcacctgatcaggggaggatctcaccaaatcaggggcggttgtctcccagtcaggatat gtacctatccatcaataagcagggagagcctggtatatcatgtatacctgaggccttgagttcctga |
|
Protein
| Protein ID | pfu_aug2.0_1210.1_01478.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1210.1_01478.t1 MSILVGRSNPEIDVMNRYEMSRFDSRDISPFYSSFPPPFFLRTPPNGVYDGRMDLMEHSVWKDRKDDPKMFPKYHPEFSH KLLHHNGISDLYDRERKLYDVNHKGDVRNRRDLTEKKGSSYPGAMLELDVTSPHVRNSVKEQSPISPSEYFYRRRDILSN SGSSHSTSPVSPFSPEQSCGKLKYPSSRNLSGPPSPPRSHGIMERSEAGVINLSTTKDVVTEHMMNGEISQNGDLESAQD VAPSSPNGSKVPPTNETSPGAPSNGVAAKRKTKCNSAVELGSPPQPLMMMAAQQGLLQQHVQQMMQGQGLTTPQIQQLLQ HQTMLQHQQQQKLHEQMLQELNEQLQMNVIQQSQLMQQQDKSKGSKAQQQLQQLSVQQQQLIQQIQQIQLQQRQYLLACL VSPFGMQQGMMLHPELQQLWKEVASQSGADPENGVKGGFNGLGSTVSTPSTQAPSAWTNGLNSNYLPAGLIGQPPVAVDV DNAERKNAILFRHGVCKWPGCDTPCEDQAAFHKHLNIEHQLDDRSTAQARVQMQVVSQLEIQLTRERDLLQGMMLHLHMK KPADPTLDTSTAQKLVSQKMSSPVSPVSMTTLHSAPSSPPKPASIISSPLKLQPSMTTISSVSAPPTPVALVSNPMSLPL GIAPPPSMSKPPTPLSQASQPATPTGGGGPMRRRVSDKSNLPISSGTSEEIQRNRDFYKSTDVRPPFTYASLIRQAIIES PHKQLTLNEIYQWFQSTFAYFRRNEATWKNAVRHNLSLHKCFMRVENVKGAVWTVDEVEFYKRRPQKLGGNMPIKDVKSP MIPDPMFGENLNASLRAALEQANLLNHHYSNGTVPMDGVEDLSMKSNRTSSSDYHKDTSPSQDGYPDVKDEASYEEEEAF LRNGQMAVTMEMRTTPPSDSVVLNLQSSSLDCVVKEEASEDGQQVFSENIAAERAVVLQQSPNEHYLRTEEQYITEERPN SHDEGRISPDQGRISPNQGRLSPSQDMYLSINKQGEPGISCIPEALSS |
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