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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1211.1_04888
Locus scaffold1211.1 : 72347 ... 100470 : +
To GenomeBrowser scaffold1211.1:72347..100470
Genes list of scaffold scaffold1211.1
Synonym pfu_aug1.0_28350.1_62525

Manual annotation
Transcript
Transcript IDpfu_aug2.0_1211.1_04888.t1
Definition-
>pfu_aug2.0_1211.1_04888.t1
atgggagttttacatttaggaatactagtgaatttcatatcatatcctgtgatcaatgcctttacatcagctgcagctat
tacaatagcatttggacaagtcaagggtattttaggattaaagaatattcctagagactttccgaatgcagtatatgaaa
catttaaacacataggagaaactagaataccagatatgatccttggtttagtgtgtcttgtcatactttttgtacttaaa
aaaatacgtcagattaaatggaaagatgaagaaaattcggatccaactacatgtacaaaaatagctcgatatattgtctg
gctgtctggtacagctgccaatgctatagttgtaatatcagcggccggtgtagctgcagcttttatcagtgagggtaaaa
acgacacactcacaatcacaggaaatctcaaatcaggtgtacccccattcaaacccccagatttctctcttcatgatgga
aatacaacttatacagctggcaatatatttatgggctcagggcttggtattgtaccactgttaggccttgtagagcttat
tgctataggaaaagcttttgcaaggcaaaataattacaagatcaagcctagtcaagaacttatagcaataggtgttgcca
atatcataagttcctttgtatcctcatacccagtcactggtagtttctcgaggactgctgttaattctcagagtggagtc
agaacacctgcttcaggaatatttacaggagctttaatcctattggctctatacgttctgacaccgctgttttactacat
tcccaaggcagctctgtctgccgttattatttctgctgtgatacaaatggtggactataaaattgtcatgacactttgga
gggtcaataaaattgatcttctaccccatgtggtgactttcgttgcctcccttgcaataggcatcgagtacggaatactc
ataggaattgctctttcattaattatattgttatatcccattgccagaccagatattcaagtagacaacataggagtaac
ggtggtaaagcctgagcatggactgttattcccagcaatagaatatgtacaggaaagagttctcaaggaaaatgaagcag
atggccgctcaaattcagtagttattgactgcagtcaagttactgctgttgactacacgaccatacagggaatcatggac
ctcatacttgattttgagagaaggaaagcaaaattagtgtttgcatcattgccagccaaggtattacatcatttacagga
tgccgacatacctcacctcatggtgagtttctctgtacaagatggctgcaaacttatacaagaggaactgaaatcagagt
tttcaaatgacagtattgatggatcagcatctggagaactaaatataaccgtgacaaatgtgaacgacaaattatag
Transcript IDpfu_aug2.0_1211.1_04888.t2
Definition-
>pfu_aug2.0_1211.1_04888.t2
atgacctccacaaatggggagagagaaccactcctaggtaccacccaaaggacctcgcccggtgggcgtgtctcgccacc
caaaacctctgtagtagagcgacatcgtagggcaaaattgagctctacggaggctgctaagaaagttataaaagatcagc
ttagttcatgctgtagtgtagaggcagtaaaaggaaaatttcctatcacaaagtggcttccacgttacaatatggtttat
actcagcatttatgggatgttttgtgtattgtttcttggggacatctaaggacattactttgggaccgactgccatcatt
gcagtttcttatgggagttttacatttaggaatactagtgaatttcatatcatatcctgtgatcaatgcctttacatcag
ctgcagctattacaatagcatttggacaagtcaagggtattttaggattaaagaatattcctagagactttccgaatgca
gtatatgaaacatttaaacacataggagaaactagaataccagatatgatccttggtttagtgtgtcttgtcatactttt
tgtacttaaaaaaatacgtcagattaaatggaaagatgaagaaaattcggatccaactacatgtacaaaaatagctcgat
atattgtctggctgtctggtacagctgccaatgctatagttgtaatatcagcggccggtgtagctgcagcttttatcagt
gagggtaaaaacgacacactcacaatcacaggaaatctcaaatcaggtgtacccccattcaaacccccagatttctctct
tcatgatggaaatacaacttatacagctggcaatatatttatgggctcagggcttggtattgtaccactgttaggccttg
tagagcttattgctataggaaaagcttttgcaaggcaaaataattacaagatcaagcctagtcaagaacttatagcaata
ggtgttgccaatatcataagttcctttgtatcctcatacccagtcactggtagtttctcgaggactgctgttaattctca
gagtggagtcagaacacctgcttcaggaatatttacaggagctttaatcctattggctctatacgttctgacaccgctgt
tttactacattcccaaggcagctctgtctgccgttattatttctgctgtgatacaaatggtggactataaaattgtcatg
acactttggagggtcaataaaattgatcttctaccccatgtggtgactttcgttgcctcccttgcaataggcatcgagta
cggaatactcataggaattgctctttcattaattatattgttatatcccattgccagaccagatattcaagtagacaaca
taggagtaacggtggtaaagcctgagcatggactgttattcccagcaatagaatatgtacaggaaagagttctcaaggaa
aatgaagcagatggccgctcaaattcagtagttattgactgcagtcaagttactgctgttgactacacgaccatacaggg
aatcatggacctcatacttgattttgagagaaggaaagcaaaattagtgtttgcatcattgccagccaaggtattacatc
atttacaggatgccgacatacctcacctcatgaggaactga
Transcript IDpfu_aug2.0_1211.1_04888.t3
Definition-
>pfu_aug2.0_1211.1_04888.t3
atgacctccacaaatggggagagagaaccactcctaggtaccacccaaaggacctcgcccggtgggcgtgtctcgccacc
caaaacctctgtagtagagcgacatcgtagggcaaaattgagctctacggaggctgctaagaaagttataaaagatcagc
ttagttcatgctgtagtgtagaggcagtaaaaggaaaatttcctatcacaaagtggcttccacgttacaatatggtttat
actcagcatttatgggatgttttgtgtattgtttcttggggacatctaaggacattactttgggaccgactgccatcatg
tcattaa

Protein
Protein IDpfu_aug2.0_1211.1_04888.t1
Definition-
>pfu_aug2.0_1211.1_04888.t1
MGVLHLGILVNFISYPVINAFTSAAAITIAFGQVKGILGLKNIPRDFPNAVYETFKHIGETRIPDMILGLVCLVILFVLK
KIRQIKWKDEENSDPTTCTKIARYIVWLSGTAANAIVVISAAGVAAAFISEGKNDTLTITGNLKSGVPPFKPPDFSLHDG
NTTYTAGNIFMGSGLGIVPLLGLVELIAIGKAFARQNNYKIKPSQELIAIGVANIISSFVSSYPVTGSFSRTAVNSQSGV
RTPASGIFTGALILLALYVLTPLFYYIPKAALSAVIISAVIQMVDYKIVMTLWRVNKIDLLPHVVTFVASLAIGIEYGIL
IGIALSLIILLYPIARPDIQVDNIGVTVVKPEHGLLFPAIEYVQERVLKENEADGRSNSVVIDCSQVTAVDYTTIQGIMD
LILDFERRKAKLVFASLPAKVLHHLQDADIPHLMVSFSVQDGCKLIQEELKSEFSNDSIDGSASGELNITVTNVNDKL
Protein IDpfu_aug2.0_1211.1_04888.t2
Definition-
>pfu_aug2.0_1211.1_04888.t2
MTSTNGEREPLLGTTQRTSPGGRVSPPKTSVVERHRRAKLSSTEAAKKVIKDQLSSCCSVEAVKGKFPITKWLPRYNMVY
TQHLWDVLCIVSWGHLRTLLWDRLPSLQFLMGVLHLGILVNFISYPVINAFTSAAAITIAFGQVKGILGLKNIPRDFPNA
VYETFKHIGETRIPDMILGLVCLVILFVLKKIRQIKWKDEENSDPTTCTKIARYIVWLSGTAANAIVVISAAGVAAAFIS
EGKNDTLTITGNLKSGVPPFKPPDFSLHDGNTTYTAGNIFMGSGLGIVPLLGLVELIAIGKAFARQNNYKIKPSQELIAI
GVANIISSFVSSYPVTGSFSRTAVNSQSGVRTPASGIFTGALILLALYVLTPLFYYIPKAALSAVIISAVIQMVDYKIVM
TLWRVNKIDLLPHVVTFVASLAIGIEYGILIGIALSLIILLYPIARPDIQVDNIGVTVVKPEHGLLFPAIEYVQERVLKE
NEADGRSNSVVIDCSQVTAVDYTTIQGIMDLILDFERRKAKLVFASLPAKVLHHLQDADIPHLMRN
Protein IDpfu_aug2.0_1211.1_04888.t3
Definition-
>pfu_aug2.0_1211.1_04888.t3
MTSTNGEREPLLGTTQRTSPGGRVSPPKTSVVERHRRAKLSSTEAAKKVIKDQLSSCCSVEAVKGKFPITKWLPRYNMVY
TQHLWDVLCIVSWGHLRTLLWDRLPSCH

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