Gene
| Gene Model ID | pfu_aug2.0_1211.1_04892 |
|---|---|
| Locus | scaffold1211.1 : 134888 ... 144015 : - |
| To GenomeBrowser | scaffold1211.1:134888..144015 |
| Genes list of scaffold | scaffold1211.1 |
| Synonym | pfu_aug1.0_20962.1_54718 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sex muscle abnormal protein 5 | GO:0000003 GO:0005070 GO:0006898 GO:0007517 GO:0008340 GO:0009792 GO:0009967 GO:0016477 GO:0016773 GO:0019915 GO:0030539 GO:0031344 GO:0032940 GO:0040028 GO:0040035 GO:0044238 GO:0044260 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1211.1_04892.t1 | 2 | 1 | DDE_3 | 6 | 63 | 5.1e-06 | 26.3 | 3.8e-09 | 9.4e-06 | 25.4 |
| pfu_aug2.0_1211.1_04892.t1 | 2 | 2 | DDE_3 | 86 | 99 | 5.1e-06 | 26.3 | 2.0 | 4900.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1211.1_04892.t1 | gi|312077972|ref|XP_003141535.1| | sex muscle abnormal protein 5 [Loa loa] | 3.0e-25 |
| pfu_aug2.0_1211.1_04892.t1 | gi|170589347|ref|XP_001899435.1| | Sex muscle abnormal protein 5 [Brugia malayi] | 1.0e-24 |
| pfu_aug2.0_1211.1_04892.t1 | gi|340368618|ref|XP_003382848.1| | PREDICTED: growth factor receptor-bound protein 2-like [Amphimedon queenslandica] | 2.0e-24 |
| pfu_aug2.0_1211.1_04892.t1 | gi|268580343|ref|XP_002645154.1| | C. briggsae CBR-SEM-5 protein [Caenorhabditis briggsae] | 2.0e-24 |
| pfu_aug2.0_1211.1_04892.t1 | gi|340724886|ref|XP_003400809.1| | 2.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1211.1_04892.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1211.1_04892.t1 atgctgatgtcaaaagacaatgctcctgttcacaagtctgtcactgccatggctgccattcatgattgtgacttttattt gattgagtatccgccttattcacctgatcttgatgcatcagactttcatctattcccaaaactgaaagcagctatttccg gcacccactttcagtccgatgatgatgtcatacttgcagtggatggctttctgaccagtcaagataagaagttctttaaa agtagtattgaggcccttaaacactggtggcaaaaatttcaagacagtatacagcatttcaaagtcttaagggatggcaa tggcaaatatttcctctgggtcataaagttcaactcattaaatgaattactggaatatcacaaaactgcgtctgttaata gagggcagagcataatgctgagagaaatgggagaaattgggtgcgaaaagaattctggtaaaaagaagctaatggctttg tacaagtttgagccacaggacccagaggaacttgcactaaacagaggtgattgtgtgttcttatggaaggaaatgtaa |
|
Protein
| Protein ID | pfu_aug2.0_1211.1_04892.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1211.1_04892.t1 MLMSKDNAPVHKSVTAMAAIHDCDFYLIEYPPYSPDLDASDFHLFPKLKAAISGTHFQSDDDVILAVDGFLTSQDKKFFK SSIEALKHWWQKFQDSIQHFKVLRDGNGKYFLWVIKFNSLNELLEYHKTASVNRGQSIMLREMGEIGCEKNSGKKKLMAL YKFEPQDPEELALNRGDCVFLWKEM |
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