Gene
| Gene Model ID | pfu_aug2.0_1215.1_18185 |
|---|---|
| Locus | scaffold1215.1 : 82556 ... 88150 : + |
| To GenomeBrowser | scaffold1215.1:82556..88150 |
| Genes list of scaffold | scaffold1215.1 |
| Synonym | pfu_aug1.0_49242.1_41462 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glucose dehydrogenase | GO:0016614 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1215.1_18185.t1 | 1 | 1 | GMC_oxred_N | 55 | 121 | 9.9e-13 | 47.8 | 6.4e-16 | 1.2e-12 | 47.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1215.1_18185.t1 | gi|699247036|ref|XP_009859908.1| | PREDICTED: glucose dehydrogenase [FAD, quinone]-like [Ciona intestinalis] | 2.0e-18 |
| pfu_aug2.0_1215.1_18185.t1 | gi|241861611|ref|XP_002416336.1| | glucose dehydrogenase, putative [Ixodes scapularis] | 1.0e-16 |
| pfu_aug2.0_1215.1_18185.t1 | gi|699247034|ref|XP_009859906.1| | PREDICTED: glucose dehydrogenase [FAD, quinone]-like [Ciona intestinalis] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_1215.1_18185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1215.1_18185.t1 atgatgatttttgttttctttatatcccggtacaatgtattcctaacaaatattgccagcatactttgtccaattagtct agccagtgcattggtatttgtgtgctggaagacggtaagctggaggaggaggccgcaacctgttaaagttcttaacgaat catatgactacatagttgttggtgccggttcgtctggatcagttttagccaatcgtctgtcagaggatccatcaaactca gtgctagtggttgaggctggagggtcaggagaatggagcttttctattgcaattccatttcttcaagggttggttttaca gtcgaaacatgactggggttataaaacggaaccacagaagtttgcttgtaaaggattaaaagatcagataatgctttcaa agagtaaaatagctaaaactgttcccgaaacgtacatttttgtgcacccccacccgaaatga |
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Protein
| Protein ID | pfu_aug2.0_1215.1_18185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1215.1_18185.t1 MMIFVFFISRYNVFLTNIASILCPISLASALVFVCWKTVSWRRRPQPVKVLNESYDYIVVGAGSSGSVLANRLSEDPSNS VLVVEAGGSGEWSFSIAIPFLQGLVLQSKHDWGYKTEPQKFACKGLKDQIMLSKSKIAKTVPETYIFVHPHPK |
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