Gene
| Gene Model ID | pfu_aug2.0_1215.1_18186 |
|---|---|
| Locus | scaffold1215.1 : 90606 ... 104050 : + |
| To GenomeBrowser | scaffold1215.1:90606..104050 |
| Genes list of scaffold | scaffold1215.1 |
| Synonym | pfu_aug1.0_11068.1_60853 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1215.1_18186.t3 | 1 | 1 | GMC_oxred_N | 1 | 205 | 0.0 | 199.5 | 0.0 | 0.0 | 199.1 |
| pfu_aug2.0_1215.1_18186.t3 | 2 | 1 | GMC_oxred_C | 251 | 284 | 7.4e-36 | 123.5 | 0.55 | 2000.0 | -1.1 |
| pfu_aug2.0_1215.1_18186.t3 | 2 | 2 | GMC_oxred_C | 316 | 448 | 7.4e-36 | 123.5 | 7.2e-39 | 2.7e-35 | 121.7 |
Transcript
| Transcript ID | pfu_aug2.0_1215.1_18186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1215.1_18186.t1 atgaatggcatggtatacgtcagaggcagtcgtcatgactttgatgactgggcagccaatggatgtcagggatggagcta caaggatgtccttccatatttcattaagtctgaaaatattcaaatttcggattgtaaaaattcagactatcatggaaaag acggtccgttgcatgtaagctctggaaacgctaccccacttgcagatatatttggagatgccatggaggaaatgggatac agaactgtggatacaaacggagaagatatgattggttattcgaaaactcagcttacaactaagaatggagtaagatgcga cactgctaaagctttcttacgaccagcaatgtcaaggccaaatctacatgtcagcataaacacaaccgtcagtaaggtaa tcattgaaaacggaagagcagtagggataaaggttataaaagacagagtggagcatgtcattagatgcaacaaggaggtc atcttgtctgctggctcaataggaacaccacaaatacttttgctttcaggaattggcccggcagaacatcttaatgaact aaggatatctgtacaggcagatttgccggttgggcaaaatctacaagatcatctttttacacctttatcgttctttccaa acgagtcgttatcagttactacaggtaaacttctgaatccaacttcgatactccaatggattgtacagggaacaggatat ttaagtatcagtggactggaaggaaatacatttgtgaaaactaacgcaaatgactcaaacaattaccctgatatacaaat gcatttatactcggtctctatgtcgaaacaagctcgtgatcgtgccttagaagtagtaaatctgaaacctgagtatgcca cagttgtaacatcaacagagaatctatcgaaggagaggtttcaaatctttgtgatcttattgcatcctaaaagtcgggga acaatcaagttgagaagcactgatcctttcgaccatcctattattgacccaaattacttaagcgaatctgaagatgtgga aacaatgataagaggtattcgttttgcccttaaagtagcaaatacttctgttttcaacaaatttggaatagatgatactc acccacactttgatatgccctcatggaggagatacaagtatggtaccgatgcatattgggaagagtatatacgtcatctt acatttaccgtgtaccatccatcttgtacatgtgccatgggaaggaaggatgatcccgaagctgttgtggatccaaacct aagagtgcgaggaatagagaacttgcgagtcgcagactgttcggtgatgaggaatataacatcaggtaacaccaatgccc ccgccatcatgattggagagaaagctgcagatcttatcttacaaagagacagtgtaaaggacataaaacagaggatccgg catattctggataaagtttga |
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| Transcript ID | pfu_aug2.0_1215.1_18186.t2 |
| Definition | - |
>pfu_aug2.0_1215.1_18186.t2 atgaatggcatggtatacgtcagaggcagtcgtcatgactttgatgactgggcagccaatggatgtcagggatggagcta caaggatgtccttccatatttcattaagtctgaaaatattcaaatttcggattgtaaaaattcagactatcatggaaaag acggtccgttgcatgtaagctctggaaacgctaccccacttgcagatatatttggagatgccatggaggaaatgggatac agaactgtggatacaaacggagaagatatgattggttattcgaaaactcagcttacaactaagaatggagtaagatgcga cactgctaaagctttcttacgaccagcaatgtcaaggccaaatctacatgtcagcataaacacaaccgtcagtaaggtaa tcattgaaaacggaagagcagtagggataaaggttataaaagacagagtggagcatgtcattagatgcaacaaggaggtc atcttgtctgctggctcaataggaacaccacaaatacttttgctttcaggaattggcccggcagaacatcttaatgaact aaggatatctgtacaggcagatttgccggttgggcaaaatctacaagatcatctttttacacctttatcgttctttccaa acgagtcgttatcagttactacaggtaaacttctgaatccaacttcgatactccaatggattgtacagggaacaggatat ttaagtatcagtggactggaaggaaatacatttgtgaaaactaacgcaaatgactcaaacaattaccctgatatacaaat gcatttatactcggtctctatgtcgaaacaagctcgtgatcgtgccttagaagtagtaaatctgaaacctgagtatgcca cagttgtaacatcaacagagaatctatcgaaggagaggtttcaaatctttgtgatcttattgcatcctaaaagtcgggga acaatcaagttgagaagcactgatcctttcgaccatcctattattgacccaaattacttaagcgaatctgaagatgtgga aacaatgataagaggtattcgttttgcccttaaagtagcaaatacttctgttttcaacaaatttggaatagatgatactc acccacactttgatatgccctcatggaggagatacaagtatggtaccgatgcatattgggaagagtatatacgtcatctt acatttaccgtgtaccatccatcttgtacatgtgccatgggaaggaaggatgatcccgaagctgttgtggatccaaacct aagagtgcgaggaatagagaacttgcgagtcgcagactgttcggtgatgaggaatataacatcaggtaacaccaatgccc ccgccatcatgattggagagaaagctgcagatcttatcttacaaagagacagtgtaaaggacataaaacagaggatccgg catattctggataaaggggatcatcaggatgataccaatgaaactggttga |
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| Transcript ID | pfu_aug2.0_1215.1_18186.t3 |
| Definition | - |
>pfu_aug2.0_1215.1_18186.t3 atgaatggcatggtatacgtcagaggcagtcgtcatgactttgatgactgggcagccaatggatgtcagggatggagcta caaggatgtccttccatatttcattaagtctgaaaatattcaaatttcggattgtaaaaattcagactatcatggaaaag acggtccgttgcatgtaagctctggaaacgctaccccacttgcagatatatttggagatgccatggaggaaatgggatac agaactgtggatacaaacggagaagatatgattggttattcgaaaactcagcttacaactaagaatggagtaagatgcga cactgctaaagctttcttacgaccagcaatgtcaaggccaaatctacatgtcagcataaacacaaccgtcagtaaggtaa tcattgaaaacggaagagcagtagggataaaggttataaaagacagagtggagcatgtcattagatgcaacaaggaggtc atcttgtctgctggctcaataggaacaccacaaatacttttgctttcaggaattggcccggcagaacatcttaatgaact aaggatatctgtacaggcagatttgccggttgggcaaaatctacaagatcatctttttacacctttatcgttctttccaa acgagtcgttatcagttactacaggtaaacttctgaatccaacttcgatactccaatggattgtacagggaacaggatat ttaagtatcagtggactggaaggaaatacatttgtgaaaactaacgcaaatgactcaaacaattaccctgatatacaaat gcatttatactcggtctctatgtcgaaacaagctcgtgatcgtgccttagaagtagtaaatctgaaacctgagtatgcca cagttgtaacatcaacagagaatctatcgaaggagaggtttcaaatctttgtgatcttattgcatcctaaaagtcgggga acaatcaagttgagaagcactgatcctttcgaccatcctattattgacccaaattacttaagcgaatctgaagatgtgga aacaatgataagaggtattcgttttgcccttaaagtagcaaatacttctgttttcaacaaatttggaatagatgatactc acccacactttgatatgccctcatggaggagatacaagtatggtaccgatgcatattgggaagagtatatacgtcatctt acatttaccgtgtaccatccatcttgtacatgtgccatgggaaggaaggatgatcccgaagctgttgtggatccaaacct aagagtgcgaggaatagagaacttgcgagtcgcagactgttcggtgatgaggaatataacatcaggatag |
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Protein
| Protein ID | pfu_aug2.0_1215.1_18186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1215.1_18186.t1 MNGMVYVRGSRHDFDDWAANGCQGWSYKDVLPYFIKSENIQISDCKNSDYHGKDGPLHVSSGNATPLADIFGDAMEEMGY RTVDTNGEDMIGYSKTQLTTKNGVRCDTAKAFLRPAMSRPNLHVSINTTVSKVIIENGRAVGIKVIKDRVEHVIRCNKEV ILSAGSIGTPQILLLSGIGPAEHLNELRISVQADLPVGQNLQDHLFTPLSFFPNESLSVTTGKLLNPTSILQWIVQGTGY LSISGLEGNTFVKTNANDSNNYPDIQMHLYSVSMSKQARDRALEVVNLKPEYATVVTSTENLSKERFQIFVILLHPKSRG TIKLRSTDPFDHPIIDPNYLSESEDVETMIRGIRFALKVANTSVFNKFGIDDTHPHFDMPSWRRYKYGTDAYWEEYIRHL TFTVYHPSCTCAMGRKDDPEAVVDPNLRVRGIENLRVADCSVMRNITSGNTNAPAIMIGEKAADLILQRDSVKDIKQRIR HILDKV |
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| Protein ID | pfu_aug2.0_1215.1_18186.t2 |
| Definition | - |
>pfu_aug2.0_1215.1_18186.t2 MNGMVYVRGSRHDFDDWAANGCQGWSYKDVLPYFIKSENIQISDCKNSDYHGKDGPLHVSSGNATPLADIFGDAMEEMGY RTVDTNGEDMIGYSKTQLTTKNGVRCDTAKAFLRPAMSRPNLHVSINTTVSKVIIENGRAVGIKVIKDRVEHVIRCNKEV ILSAGSIGTPQILLLSGIGPAEHLNELRISVQADLPVGQNLQDHLFTPLSFFPNESLSVTTGKLLNPTSILQWIVQGTGY LSISGLEGNTFVKTNANDSNNYPDIQMHLYSVSMSKQARDRALEVVNLKPEYATVVTSTENLSKERFQIFVILLHPKSRG TIKLRSTDPFDHPIIDPNYLSESEDVETMIRGIRFALKVANTSVFNKFGIDDTHPHFDMPSWRRYKYGTDAYWEEYIRHL TFTVYHPSCTCAMGRKDDPEAVVDPNLRVRGIENLRVADCSVMRNITSGNTNAPAIMIGEKAADLILQRDSVKDIKQRIR HILDKGDHQDDTNETG |
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| Protein ID | pfu_aug2.0_1215.1_18186.t3 |
| Definition | - |
>pfu_aug2.0_1215.1_18186.t3 MNGMVYVRGSRHDFDDWAANGCQGWSYKDVLPYFIKSENIQISDCKNSDYHGKDGPLHVSSGNATPLADIFGDAMEEMGY RTVDTNGEDMIGYSKTQLTTKNGVRCDTAKAFLRPAMSRPNLHVSINTTVSKVIIENGRAVGIKVIKDRVEHVIRCNKEV ILSAGSIGTPQILLLSGIGPAEHLNELRISVQADLPVGQNLQDHLFTPLSFFPNESLSVTTGKLLNPTSILQWIVQGTGY LSISGLEGNTFVKTNANDSNNYPDIQMHLYSVSMSKQARDRALEVVNLKPEYATVVTSTENLSKERFQIFVILLHPKSRG TIKLRSTDPFDHPIIDPNYLSESEDVETMIRGIRFALKVANTSVFNKFGIDDTHPHFDMPSWRRYKYGTDAYWEEYIRHL TFTVYHPSCTCAMGRKDDPEAVVDPNLRVRGIENLRVADCSVMRNITSG |
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