Gene
| Gene Model ID | pfu_aug2.0_1215.1_18188 |
|---|---|
| Locus | scaffold1215.1 : 135466 ... 137406 : + |
| To GenomeBrowser | scaffold1215.1:135466..137406 |
| Genes list of scaffold | scaffold1215.1 |
| Synonym | pfu_aug1.0_1.1_00008 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1215.1_18188.t1 | 6 | 1 | Hexapep | 16 | 40 | 8.0e-09 | 34.6 | 1.2e-05 | 0.09 | 12.3 |
| pfu_aug2.0_1215.1_18188.t1 | 6 | 2 | Hexapep | 89 | 98 | 8.0e-09 | 34.6 | 0.22 | 1600.0 | -1.2 |
| pfu_aug2.0_1215.1_18188.t1 | 6 | 3 | Hexapep | 102 | 127 | 8.0e-09 | 34.6 | 3.6e-05 | 0.27 | 10.8 |
| pfu_aug2.0_1215.1_18188.t1 | 6 | 4 | Hexapep | 134 | 160 | 8.0e-09 | 34.6 | 3.9e-05 | 0.29 | 10.7 |
| pfu_aug2.0_1215.1_18188.t1 | 6 | 5 | Hexapep | 170 | 196 | 8.0e-09 | 34.6 | 2.9e-06 | 0.021 | 14.3 |
| pfu_aug2.0_1215.1_18188.t1 | 6 | 6 | Hexapep | 201 | 219 | 8.0e-09 | 34.6 | 0.003 | 23.0 | 4.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1215.1_18188.t1 | gi|302855776|ref|XP_002959367.1| | hypothetical protein VOLCADRAFT_70813 [Volvox carteri f. nagariensis] | 1.0e-15 |
| pfu_aug2.0_1215.1_18188.t1 | gi|591322436|ref|XP_007087325.1| | PREDICTED: uncharacterized protein LOC102967994 [Panthera tigris altaica] | 2.0e-15 |
| pfu_aug2.0_1215.1_18188.t1 | gi|124505699|ref|XP_001350963.1| | conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] | 2.0e-14 |
| pfu_aug2.0_1215.1_18188.t1 | gi|597786199|ref|XP_007256565.1| | PREDICTED: histone-lysine N-methyltransferase SETD2 [Astyanax mexicanus] | 3.0e-14 |
| pfu_aug2.0_1215.1_18188.t1 | gi|629694807|ref|XP_007812695.1| | Neurofilament triplet H protein [Metarhizium acridum CQMa 102] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1215.1_18188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1215.1_18188.t1 atgatcacactgaccagaaagcccagatcgaaaacttttaaggttgtccacatcgataaggatgtccacatcgacaaaga tgtccacatcgacaaggatgtacacatcgacaaggatgcatccacatcgacaaggatgcccacatcgacaaggatgtcca catcgacaaggatgtccacatcgacaaggatgcatccacatcgacaaggatgtccacatcgacaaggatgcatccacatc gacaaggatgtacacaccgacaaggatgatgtccacatcgacaaggatgttcacaacaacaaggatgtccacatcgacaa ggatgtcaagaccgacaaggatgtccacatcgacaaagatgtccacatcgacaaggatgtcaacaccgacaaagatgtcc acatccacatcgacaacgatgtccacaccgacaaggatgcccacatcgacaaggatgtccacatcgacaaggatgtccac accgacaaggatgtccacacggacaaagatgtccacatcgacaacgatgtccacaccgacatgaatgtccacatcaataa ggatgtccacatcaacaaggatgtccacaccgacaaggatgccaacatcgacaacgatgtccacaccgacaaggatgtcc acatcgacaaggatgtccacaccgacaaggatgcccacaccgacaaggatgtcactccaagtaggcctacttga |
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Protein
| Protein ID | pfu_aug2.0_1215.1_18188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1215.1_18188.t1 MITLTRKPRSKTFKVVHIDKDVHIDKDVHIDKDVHIDKDASTSTRMPTSTRMSTSTRMSTSTRMHPHRQGCPHRQGCIHI DKDVHTDKDDVHIDKDVHNNKDVHIDKDVKTDKDVHIDKDVHIDKDVNTDKDVHIHIDNDVHTDKDAHIDKDVHIDKDVH TDKDVHTDKDVHIDNDVHTDMNVHINKDVHINKDVHTDKDANIDNDVHTDKDVHIDKDVHTDKDAHTDKDVTPSRPT |
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