Gene
| Gene Model ID | pfu_aug2.0_1218.1_28127 |
|---|---|
| Locus | scaffold1218.1 : 43704 ... 49225 : - |
| To GenomeBrowser | scaffold1218.1:43704..49225 |
| Genes list of scaffold | scaffold1218.1 |
| Synonym | pfu_aug1.0_5688.1_31020 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1218.1_28127.t1 | 3 | 1 | GAS | 42 | 110 | 0.0 | 249.0 | 2.4 | 5900.0 | -3.8 |
| pfu_aug2.0_1218.1_28127.t1 | 3 | 2 | GAS | 109 | 217 | 0.0 | 249.0 | 0.032 | 79.0 | 2.3 |
| pfu_aug2.0_1218.1_28127.t1 | 3 | 3 | GAS | 234 | 434 | 0.0 | 249.0 | 0.0 | 0.0 | 249.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1218.1_28127.t1 | gi|676456308|ref|XP_009054282.1| | hypothetical protein LOTGIDRAFT_215253 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1218.1_28127.t1 | gi|524879981|ref|XP_005096659.1| | PREDICTED: growth arrest-specific protein 8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1218.1_28127.t1 | gi|260834855|ref|XP_002612425.1| | hypothetical protein BRAFLDRAFT_263599 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1218.1_28127.t1 | gi|156385510|ref|XP_001633673.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1218.1_28127.t1 | gi|291227693|ref|XP_002733817.1| | PREDICTED: growth arrest-specific protein 8-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1218.1_28127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1218.1_28127.t1 atgtgtaatttgtgcaaacctcccaaaaagaagaagagtggaaagaaaggaaagaaggggaaaaagtccggaaaggcaaa atcccccactgtcatagatggaattcccacagaagaaatgtcaaaagaacagcttgaggaacacattgcccggctgagag aagaattagacagggagagagaggagagaaattacttccagctagagcgtgataaggtcaacacattctgggaaatcaca aaacgacagctagaggagaagaaagcggaaattagaaacaaggacagagaaatggaagacgctgaggaaaggcatcagat tgaaataaaggtatacaaacagaaggtcaagcacttgttgtttgagcaccaaaataacatctcagatctgaaggcggaga atgtgtgttcccttaaagtcgctcaagatgaacaccggcaagatgagacagaacttagaaaggataaacgggctctcaaa gtggaacttaaggaacaggagctttcacatgaagatatcatcaaaaatctcaaaaagactcatgatgaacagattacaca gttgagatctgacttcgagagacaagccagagaaatcgaagccaaatatgaaaagaagatgagggcattacgggacgaat tagatctccggagaaagacagagatccatgaaattgaggagaggaagaacggccaaatcaacgagctgatgagaacgcac gaaaaggcgttcacagatatcaagaattactataacgatatcactctcaacaatctgtccctgattaatactctgaagga acaagtagaggatatgaagaagaagtatgagttgatggagaaggacagagcagaggttatagcggagaacaagagattgg cagagcctctacaacatgctagggaagaggttgatcagctcagaaaacagctggccaactacgagaaagataaggagaca ctcaggatgaccaaagccaggttaaaggtcgcagaggaaaaccagagagccctgaagtgggagcatgaagtattagaaca aagatttgagaagacacaggacgagagagatgatttatatagaaaatttgttaaagctattcatgaagtacaacagaaga gtaatttcaagaacttattactggaaaagaaactcggagctttggcagatacattggaaaagaaggaagcacagctgaac gaggtgctatccgcctcgaacctcgatcctacggctctcactgtcgtcaccaggaaattggaggatgtcttggattccaa gaacagtgctatcaaagatctacagtacgaactggctagagtatgcaaggctcacaacgatctgctgaggacttatgaag ccaagttgacccagtttggtattcccacagaagaacttggatttaaacctttggagagtacagttgggggccaagccctg gggcaaggccctgctggacttgtgtcggccccaagctaa |
|
Protein
| Protein ID | pfu_aug2.0_1218.1_28127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1218.1_28127.t1 MCNLCKPPKKKKSGKKGKKGKKSGKAKSPTVIDGIPTEEMSKEQLEEHIARLREELDREREERNYFQLERDKVNTFWEIT KRQLEEKKAEIRNKDREMEDAEERHQIEIKVYKQKVKHLLFEHQNNISDLKAENVCSLKVAQDEHRQDETELRKDKRALK VELKEQELSHEDIIKNLKKTHDEQITQLRSDFERQAREIEAKYEKKMRALRDELDLRRKTEIHEIEERKNGQINELMRTH EKAFTDIKNYYNDITLNNLSLINTLKEQVEDMKKKYELMEKDRAEVIAENKRLAEPLQHAREEVDQLRKQLANYEKDKET LRMTKARLKVAEENQRALKWEHEVLEQRFEKTQDERDDLYRKFVKAIHEVQQKSNFKNLLLEKKLGALADTLEKKEAQLN EVLSASNLDPTALTVVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDLLRTYEAKLTQFGIPTEELGFKPLESTVGGQAL GQGPAGLVSAPS |
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