Gene
| Gene Model ID | pfu_aug2.0_1218.1_28130 |
|---|---|
| Locus | scaffold1218.1 : 77546 ... 83280 : + |
| To GenomeBrowser | scaffold1218.1:77546..83280 |
| Genes list of scaffold | scaffold1218.1 |
| Synonym | pfu_aug1.0_3472.1_37609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1218.1_28130.t1 | 1 | 1 | DUF4638 | 239 | 287 | 8.6e-07 | 28.8 | 1.5e-10 | 2.2e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1218.1_28130.t1 | gi|562830725|ref|XP_006144870.1| | PREDICTED: mucin-2-like [Tupaia chinensis] | 6.0e-08 |
| pfu_aug2.0_1218.1_28130.t1 | gi|124802231|ref|XP_001347410.1| | conserved Plasmodium protein [Plasmodium falciparum 3D7] | 8.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1218.1_28130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1218.1_28130.t1 atgaaagctctatcaccatccattcaaaagttatgctcaatgttaaactctgatcatacgtcattggacagaacagcgtc cagcatcagaccaagtatccgagatttccagagaacccaatcacgtaccaagaaaatgatggcggaggaatccgctctgt atgacctgaaaggggatgattcgtcactgctcggacgtcaaacatcaagaaccaaccgtatgagcgatactgctaaccca tccaaactgaccggtgctgagagtgatccagcacgacccaaagacacgccacctgtcatgccgagacgggagaggaggat gtcactgcccactcctggcaccactggccaggaccaaaaaccaggtcatgcaagctttgcccatcttcttagtcaagcgt ctggtcgggatcatcatgacttaggtcaaggtcatggccgtagtcatggtagctcatatgatcaccatgacagccatgac cagagtatcggtcacctaagttcaaggctgagcatcatagatagggaccatgaacatgagagtctgctgttggaggcggc cttacagacattgagggcggcagaggaacatgatgctggttcagatctacgaaggatgagcatccaaaccatgggcaagg aaaaagaaccagacaatcacccatcagtgagcagagttcaaaggaaacgtttggaaagactagaggatatcctaatggat atatcaaaagatgctcatacaaaattcaatcccagagaaatgctggaatgtggatatctaagattatcaaacagaaatat tgaaactttggagggaatgatacgagacatggggtcggatccgggaattcacgttcacagtgacgtcaccaattacgatc tatttggagagattaggaaagaaaaagaggccgaggaagagaaagcaaaacaacttatggaaatggtcatcagggccatc atcatgacaaccgtggccaccatgacaaccgtagccaccatgacagccgtggtcaccatgacaatcgtagccaccatgac aaacatggtcaccatgacaaacatggtcaccaggacaaacatggtcaccatgacaaacatggtcaccatgacaaacatgg tcaccatgacaaccgtagccaccatgacaaacatggtcaccatgacaaacatggtcaccatgacaaccatagccaccatg acaaacatggtcacaatgataaccatggacaccatgacaatcacggtcaccatacagcaggacatcatagagatcgggga catgctaatggtcaccattcacatgataaatctacggataaacatgcccatggtcactctgatgtcaacgatggaaaacg taccaattctcaaggtcacaacgtga |
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Protein
| Protein ID | pfu_aug2.0_1218.1_28130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1218.1_28130.t1 MKALSPSIQKLCSMLNSDHTSLDRTASSIRPSIRDFQRTQSRTKKMMAEESALYDLKGDDSSLLGRQTSRTNRMSDTANP SKLTGAESDPARPKDTPPVMPRRERRMSLPTPGTTGQDQKPGHASFAHLLSQASGRDHHDLGQGHGRSHGSSYDHHDSHD QSIGHLSSRLSIIDRDHEHESLLLEAALQTLRAAEEHDAGSDLRRMSIQTMGKEKEPDNHPSVSRVQRKRLERLEDILMD ISKDAHTKFNPREMLECGYLRLSNRNIETLEGMIRDMGSDPGIHVHSDVTNYDLFGEIRKEKEAEEEKAKQLMEMVIRAI IMTTVATMTTVATMTAVVTMTIVATMTNMVTMTNMVTRTNMVTMTNMVTMTNMVTMTTVATMTNMVTMTNMVTMTTIATM TNMVTMITMDTMTITVTIQQDIIEIGDMLMVTIHMINLRINMPMVTLMSTMENVPILKVTT |
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