Gene
| Gene Model ID | pfu_aug2.0_1218.1_28132 |
|---|---|
| Locus | scaffold1218.1 : 139805 ... 146095 : - |
| To GenomeBrowser | scaffold1218.1:139805..146095 |
| Genes list of scaffold | scaffold1218.1 |
| Synonym | pfu_aug1.0_3472.1_37607 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1218.1_28132.t1 | 2 | 1 | 5_3_exonuc | 13 | 26 | 1.5e-07 | 31.6 | 1.5 | 3700.0 | -1.9 |
| pfu_aug2.0_1218.1_28132.t1 | 1 | 1 | XPG_I | 34 | 121 | 3.9e-30 | 103.7 | 3.7e-33 | 9.2e-30 | 102.5 |
| pfu_aug2.0_1218.1_28132.t1 | 2 | 2 | 5_3_exonuc | 108 | 156 | 1.5e-07 | 31.6 | 2.8e-10 | 6.8e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1218.1_28132.t1 | gi|524898322|ref|XP_005105611.1| | PREDICTED: flap endonuclease 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1218.1_28132.t1 | gi|676446345|ref|XP_009051049.1| | hypothetical protein LOTGIDRAFT_114414 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1218.1_28132.t1 | gi|156398094|ref|XP_001638024.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1218.1_28132.t1 | gi|410909029|ref|XP_003967993.1| | PREDICTED: flap endonuclease 1 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_1218.1_28132.t1 | gi|118405170|ref|NP_001072959.1| | flap endonuclease 1 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1218.1_28132.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1218.1_28132.t1 atggagaaactacaaggtgatgaggagaacatagagaaattcaacaggagattagttaaagtatcaaagcagcataacga ggaatgtaaagaattactcaaactgatgggcattccttatgtggaggcccctggggaggcagaagctcagtgtgctgcct tagtaaaggcagggaaagtgtatgctacgggtacagaggacatggatgccctcacctttggtacaaatgtacttctacga catctcactgttagtgaggcaaggaaactacccataaaagaattcagctacaacagagtactggatgagttaggtgtaga taaagaccagtttatagatttgtgcattttacttgggtgcgattattgtgattcgattcgaggcataggaccgaaacgag cgtatgatttgatcaaacagcataagaacattgaggaaattctcaaacacttagactcaaagaggaaagaggactggatg tttaaggaggcacgtagattgttccaggaacctgatgttgctgatcctgaagaattagaacttaaatggggagaaccaga tgaggaaaatcttgtagaatacatggtcaatcagaaaaactttagtgaagaaaggatacgtaatggagtaaagaaattac ttaaagccaagcagggaactacacaaggacgtctggattctttcttctcagtggtatcgacacattcatcgacaaaaaga aagcaagacgagcagaaagggtctgcaaagaagaaggcaaaggggggtggattcaaacgaccaaaataa |
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Protein
| Protein ID | pfu_aug2.0_1218.1_28132.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1218.1_28132.t1 MEKLQGDEENIEKFNRRLVKVSKQHNEECKELLKLMGIPYVEAPGEAEAQCAALVKAGKVYATGTEDMDALTFGTNVLLR HLTVSEARKLPIKEFSYNRVLDELGVDKDQFIDLCILLGCDYCDSIRGIGPKRAYDLIKQHKNIEEILKHLDSKRKEDWM FKEARRLFQEPDVADPEELELKWGEPDEENLVEYMVNQKNFSEERIRNGVKKLLKAKQGTTQGRLDSFFSVVSTHSSTKR KQDEQKGSAKKKAKGGGFKRPK |
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