Gene
| Gene Model ID | pfu_aug2.0_122.1_06979 |
|---|---|
| Locus | scaffold122.1 : 58185 ... 70725 : - |
| To GenomeBrowser | scaffold122.1:58185..70725 |
| Genes list of scaffold | scaffold122.1 |
| Synonym | pfu_aug1.0_11916.1_39262 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gdnf-inducible zinc finger protein 1-like | GO:0003676 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_122.1_06979.t1 | 1 | 1 | BTB | 64 | 142 | 1.6e-10 | 40.9 | 1.7e-13 | 3.6e-10 | 39.7 |
| pfu_aug2.0_122.1_06979.t1 | 6 | 1 | zf-H2C2_2 | 482 | 497 | 1.3e-10 | 41.0 | 0.37 | 790.0 | 0.6 |
| pfu_aug2.0_122.1_06979.t1 | 6 | 2 | zf-H2C2_2 | 529 | 540 | 1.3e-10 | 41.0 | 0.11 | 230.0 | 2.3 |
| pfu_aug2.0_122.1_06979.t1 | 6 | 3 | zf-H2C2_2 | 615 | 625 | 1.3e-10 | 41.0 | 0.034 | 73.0 | 3.9 |
| pfu_aug2.0_122.1_06979.t1 | 6 | 4 | zf-H2C2_2 | 632 | 656 | 1.3e-10 | 41.0 | 4.2e-06 | 0.0089 | 16.2 |
| pfu_aug2.0_122.1_06979.t1 | 6 | 5 | zf-H2C2_2 | 663 | 685 | 1.3e-10 | 41.0 | 0.011 | 22.0 | 5.5 |
| pfu_aug2.0_122.1_06979.t1 | 6 | 6 | zf-H2C2_2 | 689 | 711 | 1.3e-10 | 41.0 | 3.1e-10 | 6.5e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_122.1_06979.t1 | gi|524873722|ref|XP_005093604.1| | PREDICTED: uncharacterized protein LOC101845390 isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_122.1_06979.t1 | gi|524873720|ref|XP_005093603.1| | PREDICTED: uncharacterized protein LOC101845390 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_122.1_06979.t1 | gi|676447241|ref|XP_009051343.1| | hypothetical protein LOTGIDRAFT_75481, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_122.1_06979.t1 | gi|672059633|ref|XP_008763846.1| | PREDICTED: zinc finger protein 707-like, partial [Rattus norvegicus] | 2.0e-20 |
| pfu_aug2.0_122.1_06979.t1 | gi|658837298|ref|XP_008434170.1| | PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like [Poecilia reticulata] | 2.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_122.1_06979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06979.t1 atgcaattgatattcttgaatctctgtcaagaggactgtgttatgccatacaatctgttaggtcaaatttgcttcaaatc ccactctagatgtatgcttgatgagtttgaaatgacaagtaaccaatcagctagccaggatttcactgagaacaacttac caagagaacttatgagtaagatgtttggacttctgaaggagaacatgttctgtgatgctgtacttgtggctggacagaag gaaattagggtacataaattggtgttgatggcagccagtcctttcctcttgagcaagatgaacaacccgagactaggtga ttccgtgcgcggtgaatcggtaagagtcaaactaccgagtgatattccagtagatgtggcatcacagttagtccactacc tgtatgacagcaaggagtttgtgaataactttgagcttgataagacccttcttaacgtacctaatgaagacatatcaatt agtgttgtattaagtgcttatgattcttcaacaaaacaaccacaaaaatccacgcaatctcagacagttgaaagggagtt ccagctaccgataccaaagtcaacttcacatgctgtacctaacacaggtaacataactgtgagtagtgtctcaccatcaa agtcagtccctgagaaaaacacgcctaaaccaagtccgccaaaacccacacatttgtacggaactcgaacagcttcaggc agtgtcaaaaaacggacttttcaagatagcccatcagaaaagggatcatatgccagtcccccatcaaaaaaaggtgtgga gaaatcctcaacaaacgataacagtgggggtgtaaaggaaattgtgagtcatattacaaaaacttccacagatattacgt ctgcacattctagtcacattactagtcaccccagaaaaagaaggctttctctgatggcacaagaagctgtacagcctatg cctgtggaggagtctgtagatgatatattagatgactttgatgatgacgaggacattgattatgttcctactcctcaaat aacaactcagtctggcatgcagagagcagtttttgagggttctaggaagggcaagacactcaaatctttaaagaagtcaa cagcctattaccaagcactgaagaaaagtaaaaggaaaatgaacccagcttacaatacaatgaacaaaggttccactctg ttacggcctccacccaagaagagagcgcatgagtttgctgaaagtgagtctaagcaagcagagacggaaataaaagaaat agaggagttcttaaaagcagatgttgagccatctataaagcttccaacaaagaagctgctttattcccaaatgggaaaga gaaaattgtcctccagaacagttaatttagctggtttagggcgctttactgcggagttagaaaaacgagcagccgacata gcaactggagatcgacattttatttgtaacttatgtgataacgaattcgtatttcctaaaagatgcattactcatgtagt cagaactcatgatgtatcaattactgaagccacaaaagagattacggtggcaaagaaaagcaactccccgaagaagtgtg aaatatgtggctatgtatccaaagaaaagaatcagagttactattacattcattatcacaagtattttagacacggtata cctttaccaaaaggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn ggaaaccgtttgtttgtgacatatgtgggaaagagtgcttcacaaaatttcagttgaaggatcataaacttatccacaca gagaaaacaccgtttgtttgtgaaacttgcggcactggattcaagtctcgaacctgtctccacagtcatgtataccataa acataacacaagcaggaaacatgcctgtaatgaatgtgatagaacatttaaaactaaaacacagctgacggtacatctac gaactcacactggagagaaacctttcgcttgtccagaatgcaatggatcatacagatcaacaactcgaggcaacatgaga ctgcacctcactaataaacacaagtttactgttgataaaatcaacaaactaatggcagagattaaaccaacagcagaggt tggaatagaaactgttgatggtgtaagtgatttcaaacccttacccttgaaaaagtcacaacccaaacctgctgcaaaaa aggctcgaaaaaactcgggagttgttccgaatgctagcaatatggttatggttttgaacgaccagggtgaagtggatgtc ttagacaatgttaagtatatagaaagtgatgtaacaaagccttacaatgagccacctttagattctcttcaccctacgat taccaacatgttgacggagccactacctccagcactgtcagtgtcacaaggtaaaggtaagtacaactcacctaacaccg gccataataccaggagacgaggtcagtcatacaacctccatactgatctgatctccgggggtcagggtccatctctcacc atgcctggggacgatgatagtggtgatgacaatactgatgatgatgatcctggccagcttgttataaacacagatgaacc atcatcacagcctttgtacacggctcagagccaatctatcaatgcggctcaaaaccaatctatcggcaccaaacctacag gtgaaatgttacctgaccagaacttgactctgctaactgctgaccagggacaattcaatgtaacgggggatttaaggaat gtctcccacgaagagattggtaatcatattcttgtgcaggatttacgacatgtaggtagtgagctaaagacagctacaaa tgagcagatattgcaactagtagctcagactcaacagccaacaaaagctgagcagctttatcctgtagctgtagctgcaa atagaggagaagctccacaagcaggtgccatcaccctgcctggaggtctacagctacacttccacaacatgatcagtgat aaaaatcaaacagttgtgcagctacaaatacaagagagcccatctggacaacagaatctgaatcagcaacttggattact cacaaatgtgactcagaaggtaccacaaactgtcatatcacctgagcctcaacctgtcagttataagaaggcagcagtgg ctaacaatggagtaccagcatcattctactatcactacataaatcctaaagctcaagaagacatacaaggtaccaacaat tctaacattgcagttactgatgttatgctatctagtagagactcactttcacttaatgagtcggcaggtcaggccttgct acagaatcctcatcagggtattggtaatacacgtcagaatctcattgccgtgtcgtctgccccaacacagtcatatacag atccaaacggtgtttatcctgttcatttctaccaaaatgaatataatcaaaattttcagtaa |
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Protein
| Protein ID | pfu_aug2.0_122.1_06979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06979.t1 MQLIFLNLCQEDCVMPYNLLGQICFKSHSRCMLDEFEMTSNQSASQDFTENNLPRELMSKMFGLLKENMFCDAVLVAGQK EIRVHKLVLMAASPFLLSKMNNPRLGDSVRGESVRVKLPSDIPVDVASQLVHYLYDSKEFVNNFELDKTLLNVPNEDISI SVVLSAYDSSTKQPQKSTQSQTVEREFQLPIPKSTSHAVPNTGNITVSSVSPSKSVPEKNTPKPSPPKPTHLYGTRTASG SVKKRTFQDSPSEKGSYASPPSKKGVEKSSTNDNSGGVKEIVSHITKTSTDITSAHSSHITSHPRKRRLSLMAQEAVQPM PVEESVDDILDDFDDDEDIDYVPTPQITTQSGMQRAVFEGSRKGKTLKSLKKSTAYYQALKKSKRKMNPAYNTMNKGSTL LRPPPKKRAHEFAESESKQAETEIKEIEEFLKADVEPSIKLPTKKLLYSQMGKRKLSSRTVNLAGLGRFTAELEKRAADI ATGDRHFICNLCDNEFVFPKRCITHVVRTHDVSITEATKEITVAKKSNSPKKCEICGYVSKEKNQSYYYIHYHKYFRHGI PLPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPFVCDICGKECFTKFQLKDHKLIHT EKTPFVCETCGTGFKSRTCLHSHVYHKHNTSRKHACNECDRTFKTKTQLTVHLRTHTGEKPFACPECNGSYRSTTRGNMR LHLTNKHKFTVDKINKLMAEIKPTAEVGIETVDGVSDFKPLPLKKSQPKPAAKKARKNSGVVPNASNMVMVLNDQGEVDV LDNVKYIESDVTKPYNEPPLDSLHPTITNMLTEPLPPALSVSQGKGKYNSPNTGHNTRRRGQSYNLHTDLISGGQGPSLT MPGDDDSGDDNTDDDDPGQLVINTDEPSSQPLYTAQSQSINAAQNQSIGTKPTGEMLPDQNLTLLTADQGQFNVTGDLRN VSHEEIGNHILVQDLRHVGSELKTATNEQILQLVAQTQQPTKAEQLYPVAVAANRGEAPQAGAITLPGGLQLHFHNMISD KNQTVVQLQIQESPSGQQNLNQQLGLLTNVTQKVPQTVISPEPQPVSYKKAAVANNGVPASFYYHYINPKAQEDIQGTNN SNIAVTDVMLSSRDSLSLNESAGQALLQNPHQGIGNTRQNLIAVSSAPTQSYTDPNGVYPVHFYQNEYNQNFQ |
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