Gene
| Gene Model ID | pfu_aug2.0_122.1_06980 |
|---|---|
| Locus | scaffold122.1 : 160186 ... 172408 : + |
| To GenomeBrowser | scaffold122.1:160186..172408 |
| Genes list of scaffold | scaffold122.1 |
| Synonym | pfu_aug1.0_236.1_65314 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_122.1_06980.t1 | 2 | 1 | 7tm_1 | 27 | 130 | 2.6e-09 | 36.6 | 3.5e-13 | 2.6e-09 | 36.6 |
| pfu_aug2.0_122.1_06980.t1 | 2 | 2 | 7tm_1 | 271 | 377 | 2.6e-09 | 36.6 | 0.013 | 96.0 | 1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_122.1_06980.t1 | gi|676448817|ref|XP_009051852.1| | hypothetical protein LOTGIDRAFT_159266 [Lottia gigantea] | 3.0e-12 |
| pfu_aug2.0_122.1_06980.t1 | gi|72015117|ref|XP_782049.1| | 2.0e-07 | |
| pfu_aug2.0_122.1_06980.t1 | gi|291229520|ref|XP_002734723.1| | PREDICTED: probable G-protein coupled receptor 101-like [Saccoglossus kowalevskii] | 2.0e-06 |
| pfu_aug2.0_122.1_06980.t1 | gi|391332056|ref|XP_003740454.1| | PREDICTED: uncharacterized protein LOC100900392 [Metaseiulus occidentalis] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_122.1_06980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06980.t1 atggatagatactcaaaatccccaaaaggttcgaccgctactcgaataatggactgtactttgataacgactgttattgg ttcggttttgaattcaacatttctaggaatttctacatcttatggtgcttgggttatgggagaggtatcctgtcaggtat ttgctcttgtcagctattttcttgtgtctagcgcagcatggttatctgctctagcagcttttgaaaggtattacaaagta gcgtcagcagacgaccatctgtccacattttcagaagttaacagtaagattttgatagcgggaacatacatgctgtcttt cgtcctctgtactggaccattgtatggatggggagaatattcacatttcaaaggtaaagttctgctgacagccactttaa ccattgacgaatcgaatttcatctcaataccacgaagttctctaggatttaacggcgcatcgtatttttgtaaaccgatc gctgtgacgtcacaagttcctgtgatggaagttcttaaagaaatatgttactctttcgtgacgtcagagttaccaaacgt caatatacgaacaccgtctgtaaactgtacttcagggaatgttatctttactcttagatcaacggagttctcagttattg aagacatatataacaaccatttggctgggaaattaagtgctaagcttgccggtgccttatcttttggatttgggaaatta ttgaatacgactgctaatttttccgtacagacaagtatggatataaatgaaatttcggagtatcgaaatgtgtttatgcc ttttcaaggacttggtgtgtgtacattagacttttcgcctgttaatgagttagttgtgtcttctacatcctacatcatca ttaccacgatgctaatcccttacagtctaacgttattctgtgccatagccatgtacgtcaaatatcacacgggagcggtc aacccatgcttctctgacgttatgtatttacgtattatatacgtgtgtggttctttggctttaatcctttgcctccctta ctacgtcataaactatatgaatatgcacagtgcgtatgtatcaaaggaagccaactttgtatgtactcttctattctata actcttcgttgttagtagctataccgtactttctgtaccgattccctagtatcagattccgacgtagaagagaacgttgc acgcaagccgagactatcatgttgaatggattctgcgaggagagctcaacaagcagaaactctataaaatacgactccgt ttaa |
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Protein
| Protein ID | pfu_aug2.0_122.1_06980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06980.t1 MDRYSKSPKGSTATRIMDCTLITTVIGSVLNSTFLGISTSYGAWVMGEVSCQVFALVSYFLVSSAAWLSALAAFERYYKV ASADDHLSTFSEVNSKILIAGTYMLSFVLCTGPLYGWGEYSHFKGKVLLTATLTIDESNFISIPRSSLGFNGASYFCKPI AVTSQVPVMEVLKEICYSFVTSELPNVNIRTPSVNCTSGNVIFTLRSTEFSVIEDIYNNHLAGKLSAKLAGALSFGFGKL LNTTANFSVQTSMDINEISEYRNVFMPFQGLGVCTLDFSPVNELVVSSTSYIIITTMLIPYSLTLFCAIAMYVKYHTGAV NPCFSDVMYLRIIYVCGSLALILCLPYYVINYMNMHSAYVSKEANFVCTLLFYNSSLLVAIPYFLYRFPSIRFRRRRERC TQAETIMLNGFCEESSTSRNSIKYDSV |
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