Gene
| Gene Model ID | pfu_aug2.0_122.1_06982 |
|---|---|
| Locus | scaffold122.1 : 224680 ... 247826 : + |
| To GenomeBrowser | scaffold122.1:224680..247826 |
| Genes list of scaffold | scaffold122.1 |
| Synonym | pfu_aug1.0_236.1_65318 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna helicase mcm9 isoform x1 | GO:0000724 GO:0003677 GO:0005524 GO:0005634 GO:0006260 GO:0007276 GO:0016787 GO:0097362 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_122.1_06982.t1 | 2 | 1 | MCM | 303 | 469 | 0.0 | 330.7 | 0.0 | 0.0 | 231.4 |
| pfu_aug2.0_122.1_06982.t1 | 2 | 1 | Mg_chelatase | 343 | 371 | 5.9e-09 | 35.3 | 0.00015 | 0.46 | 9.6 |
| pfu_aug2.0_122.1_06982.t1 | 1 | 1 | AAA_5 | 347 | 469 | 7.5e-10 | 38.6 | 7.0e-13 | 2.1e-09 | 37.2 |
| pfu_aug2.0_122.1_06982.t1 | 2 | 2 | Mg_chelatase | 393 | 460 | 5.9e-09 | 35.3 | 1.6e-08 | 4.8e-05 | 22.6 |
| pfu_aug2.0_122.1_06982.t1 | 2 | 2 | MCM | 490 | 630 | 0.0 | 330.7 | 1.7e-31 | 4.9e-28 | 97.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_122.1_06982.t1 | gi|524894798|ref|XP_005103890.1| | PREDICTED: uncharacterized protein LOC101864319 [Aplysia californica] | 0.0 |
| pfu_aug2.0_122.1_06982.t1 | gi|676466665|ref|XP_009057638.1| | hypothetical protein LOTGIDRAFT_121966, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_122.1_06982.t1 | gi|390346753|ref|XP_785765.3| | PREDICTED: DNA helicase MCM9 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_122.1_06982.t1 | gi|558162304|ref|XP_006123136.1| | PREDICTED: DNA helicase MCM9 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_122.1_06982.t1 | gi|327261648|ref|XP_003215641.1| | PREDICTED: DNA helicase MCM9 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_122.1_06982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06982.t1 atgcaagaaaacgaggaacttaaagaacttaaagatgttgtacaaagatatgcagagaaacatcacaaagctgacttggt taggattttattggaagaggacgataatgaccattactccatctctttgcatgcactaacattatttgagtacagtatgg tgacatgtgacctattattgaccagacctgaccaggctctacctatgtttgatgtggcactggctgaggctcagagtgtt gtcatggaaacacatgtagaaaaagatgatatgggtgtgaagaagaatgtgcatgccagagtgatgtcacttcctttatg tccagagctacatagaacatccctccccaggacagctgatgttggttgttttctctctataataggtactgtaatccgga ccactgtagtacgtatgctagaatatgagagagagtacatatgtaccaagtgtagaaatgtcttctctgtgcaggctgat tttgaacaatactacagtgtatgtaagccaaacaaatgcagcaacgagacttgtaattcgacatcttttacatccctcag tgacacaggttgtcagccacaaaaatgcaggaattatcaggaaatcaagattcaggagcaggttcagagactagctccag gtacaataccacgatctatatgggttgtactagatgatgaccttgtagacacttgtaaggctggagatgatgttattata tgtggcatcataaagagaaggtggcgaccgacttctatagacgctaagtgtgatatagaggtagtcatgcaggctaacca tgtacaggtcactaatgaacagaggaacattgttctggtcactcaggaattgagaaatgagatcaccaagttttgggagg atcataagctgaatccgctttctgggagaaatgagatattggccagtctgtgtccacaggtatatggactgtatgtggtc aaactggctgttgccatggtactagcaggtggtgttcagagggttgatgagacaggtaccagggtgagaggagaagttca catgctgttagttggagatccaggcacaggaaaatcccagttcctgaagtatgccagtaagattacaccacgatcagtat taactacaggaataggaagtactagtgctggacttactgttacagctgtaaaggatggaggagaatggcagttagaggct ggtgccttggtgttagctgatggaggactttgttgtatagatgaatttaacagcatcagagagcatgataaagctagtat acatgaagctatggaacaacaaaccatcagtgtagccaaggctggcatggtgtgtaaactagatactaagacaaccatac tggcagctaccaatcctaaaggtcactacgaccctaatgaggcaagtgacagctacaataatcttcatgttattgctaca tgtgatgcaaaacctcttatcattcactttaaatcactttgtgtgaatgtagccctggctagtccattgttgagcaggtt tgatttggtactggtactgttggattctcagaatgaggactgggacagggtggtatctagctttattctggaaaacaagg acccacttggtgagatagacccaaagtccctgtggggaatggagaagatgcaggcctatctgtctcttataaagaccatc aatccagaacttacagaggattctataagggttttaagtcagtactataaggcacaaaggggggcagatgagaggaacgc cgccagaacaacaatgaggctgctacaaagcatgatacgactggctcaagctcatgccagatttatgttccgggaggaag taacagtagaagatgctgttgttgctgtcactatgatggaatcatctatgcagggagctgctttactaggaggagttaat gcccttcacacagcttttcctgagagtgcagaggatgaatacagattacaagctgaaatggttctgaccagattaaatct tcctgatttactggagaatgagagtaagagactgcaggatatggagaggaggagggattcattattaggagacctatcca atcagaacagccgtcacgaatcacaaaacgtgccgcatgatcggatctcaaattatgtcactgaaggtacatctgtccag gaatctggtcccataatagatagggatactccaatgatagccagccacaaagataaaactgattcgtctgtaacaaatca aagtatggacaacaaacaaaaagaacggaaaataacagatgacagtatctgtaatgtatcaaatgtttcattaacagatt tgcttaattcaagttctgatggtgatggtcttgagacaagctttagaccagttgtctgtccttcagtaggacctacacca gagggagcctctgacactcctcttacatccactcaagtgtcttacacatcatctcaagtacaccttcggaaatctgtggg ggatttatcaaagatcgataattgtgacgttacgtctaagggttctgaaacagtcattacaaaaactttgaaaaatagag aaaatgaaagcaaaaagaaagttgataatgtagattttaatgaaagtgatttagcagaaaatacagatgaaagctgtaca cttataggcaaagaaagaggaggaatgaaacttatatatgccaagaaagacaatcataacagtgctcagaggaaggctgg tgaacacttggttcagaaaatgagaggcaagttcgataaatataaaagagggttaggatctgaccaagcaaaaatgacag aaagttgtagtgatgcagaaaaaaacaatgaaacaaatctggagcgtgtaaacaattaccatcaatctttgggtaataaa gacacggtcaatgaacagcaacatggaaggaatccaaatacagacaagagaaagaggaagatttcacagtcaaccatgac aaaactgaaacaattcaaatttaccgaagaaaattcttcatcagatactaaaaataacagtctggatcagagtctcgatg actccatttttaaagatttgacagatgtacataactcaaaggagcatcgggatgtcttatcagataagaatttatcagaa aatttacttgttcacgagaaaaaatcatgctccactggacagagtaaactgagtacaaagaaaggagtaggtgacatttc aacccttgataaagaagggacctcatctttatccaaaactcaaaaaaattctgatagatcatcattttccataaaagaga cagataaaagagatactagagaagtcagtnnnnnnnnnnnnnnnnnnnnnnnntag |
|
Protein
| Protein ID | pfu_aug2.0_122.1_06982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06982.t1 MQENEELKELKDVVQRYAEKHHKADLVRILLEEDDNDHYSISLHALTLFEYSMVTCDLLLTRPDQALPMFDVALAEAQSV VMETHVEKDDMGVKKNVHARVMSLPLCPELHRTSLPRTADVGCFLSIIGTVIRTTVVRMLEYEREYICTKCRNVFSVQAD FEQYYSVCKPNKCSNETCNSTSFTSLSDTGCQPQKCRNYQEIKIQEQVQRLAPGTIPRSIWVVLDDDLVDTCKAGDDVII CGIIKRRWRPTSIDAKCDIEVVMQANHVQVTNEQRNIVLVTQELRNEITKFWEDHKLNPLSGRNEILASLCPQVYGLYVV KLAVAMVLAGGVQRVDETGTRVRGEVHMLLVGDPGTGKSQFLKYASKITPRSVLTTGIGSTSAGLTVTAVKDGGEWQLEA GALVLADGGLCCIDEFNSIREHDKASIHEAMEQQTISVAKAGMVCKLDTKTTILAATNPKGHYDPNEASDSYNNLHVIAT CDAKPLIIHFKSLCVNVALASPLLSRFDLVLVLLDSQNEDWDRVVSSFILENKDPLGEIDPKSLWGMEKMQAYLSLIKTI NPELTEDSIRVLSQYYKAQRGADERNAARTTMRLLQSMIRLAQAHARFMFREEVTVEDAVVAVTMMESSMQGAALLGGVN ALHTAFPESAEDEYRLQAEMVLTRLNLPDLLENESKRLQDMERRRDSLLGDLSNQNSRHESQNVPHDRISNYVTEGTSVQ ESGPIIDRDTPMIASHKDKTDSSVTNQSMDNKQKERKITDDSICNVSNVSLTDLLNSSSDGDGLETSFRPVVCPSVGPTP EGASDTPLTSTQVSYTSSQVHLRKSVGDLSKIDNCDVTSKGSETVITKTLKNRENESKKKVDNVDFNESDLAENTDESCT LIGKERGGMKLIYAKKDNHNSAQRKAGEHLVQKMRGKFDKYKRGLGSDQAKMTESCSDAEKNNETNLERVNNYHQSLGNK DTVNEQQHGRNPNTDKRKRKISQSTMTKLKQFKFTEENSSSDTKNNSLDQSLDDSIFKDLTDVHNSKEHRDVLSDKNLSE NLLVHEKKSCSTGQSKLSTKKGVGDISTLDKEGTSSLSKTQKNSDRSSFSIKETDKRDTREVSXXXXXXXX |
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