Gene
| Gene Model ID | pfu_aug2.0_122.1_06990 |
|---|---|
| Locus | scaffold122.1 : 399939 ... 403562 : + |
| To GenomeBrowser | scaffold122.1:399939..403562 |
| Genes list of scaffold | scaffold122.1 |
| Synonym | pfu_aug1.0_751.1_22287 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_122.1_06990.t1 | 1 | 1 | rve | 2 | 87 | 5.3e-20 | 71.7 | 3.9e-23 | 1.2e-19 | 70.6 |
Transcript
| Transcript ID | pfu_aug2.0_122.1_06990.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06990.t1 atgtgcgattcttttacgaagtggacagaagcaattccaattcctgaccaagaggcagctacagtcacaaaagcattcgt tgatacattcatctccaggttttgggctccattgcagatccattcagatagaggccgaaattttgagtctgaagtattca gccagatgtgcaagatgtttggaatcgacaaaacaagaacaactgccatgcgtcctcagagcaacggaaatattgaaagg ttccacagaacactagcgtccatgctgacgatgtatttcaaagatgcgcaaaacaaatgggacatatacttgcagcaagt gatgatggcctacagatcagccgtccacgccagtacgaagcaaacaccaaataggatggtatttggtcgagaaacaaccc ttccaattcagatactgttcggaaagcctactgataaccttcagaatacagagagctacctgagtgacctagaagggaaa cttgaaagaatacacaatgttgccaggaagtccctaaagttcaacttcgtagtgcagaagaaacgatatgacctttcagc aagaaagcagcaatttagtataggggatcctgtctgggtttatgatacacttaggaaagtgggggtatgcacaaaactga catcgccttggaaaggaccagctgtcattgtaaaggttctggatgacgtacattacaaggataaaaacggcagtagtaca tcacaaatgcctccaaaacaacatacctgctggatttgccatgaggtgtttaccaatgcccgtgatatgaagaaccacat gtcctcagttatccacagcgtgctgcagaggaaacagcccaggcactcctccgtggagtcggagtcgcggtttgtgcccg actacgaggcaagtactccgccagagaagagatcgcggagggagtatgaccctgaatacccagcttcaatgctgtgggca gagggatccccgatgctttggtacaaaatcagcatcagcaaaaaggtgtttgccagctccaaggatctttccagtctgtg tagacgaattagcctctgcaagtcggcagtgattgatccaccaagcaagttcagaccatatggtgacaggaagtccaaac taagagatgcagccgcaaagaccttagggatgtcatcaaaatatatcagtgagatcggttttgcaactgcagtggaattc gagatcacaccaatatcgacaacaacacgcaatacctcctgtccctccagcgaacttcctagtagcaataacatcactga tgccaccaaaactgcaaacaaagataatgatgatcctgccaacaacaaagtggaggaaaaagctagacagatgcatgcag aactagtttcagtcgcaacagaaaactccaccacaccagcaccagatgttgcaaatactggagaagctgacaatcagccc gttgcaactgtggaaccagcactgtttgcacccaacaacatcactgggtctgaagggacatgcatcaaggaaactccgac gaaggaagttgttcctactatgatctcggtagctgtggagagttcagaacctaacgaatcttgtcctagtgaagatggaa atgatgatgcaagtaaggttgatgctataagtactgacgtgtcattggtacaagggacgaaccaccctccactgtcgccg gttcaatttgcaacggaggagatccaaccgatggaggctgtagatagagtattaagtccgccctctccgtttgcagacac ggtgtttgcccatgatgaacagtcgaacttcccttgtattggacctttgagtacttgctctgtcaccagcagcccagtaa agtcaagtcagccaacaacccaaaacccaaacacgcaagcgaaagaaattctttctttgggatgcatgccgctttgtcca ccagctcgacgtaattgggacagggagatcccatccacaagaggaaacatcgccttaacatggccaccatacaaatggtg tcagatgtcccctgatcaaaaattgctgcagtgggaatatgcgtcgatgcgctttgaacaagagaaaagtgactgttgtt cccttgaaaggggagaactcttagataaatataatttcttagcactgccggggtcgaatattccaccgtacgattcgccg atgagaaaggcacgttactacacgtatgaaactctccgcacttccccttcagctgaactgttgaaacagatgctccttgc tagagaagctcgagacacatctgtggacgatttaattcagacattnggggctcttgtttttttaatatttatgaaaaatg gtaaccatggtaatataattatgttgatatcgccaaccagagccgagtaccttgtgtttactgttattattgccatgttg atgtcattttacctgactaatgaagactag |
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Protein
| Protein ID | pfu_aug2.0_122.1_06990.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_122.1_06990.t1 MCDSFTKWTEAIPIPDQEAATVTKAFVDTFISRFWAPLQIHSDRGRNFESEVFSQMCKMFGIDKTRTTAMRPQSNGNIER FHRTLASMLTMYFKDAQNKWDIYLQQVMMAYRSAVHASTKQTPNRMVFGRETTLPIQILFGKPTDNLQNTESYLSDLEGK LERIHNVARKSLKFNFVVQKKRYDLSARKQQFSIGDPVWVYDTLRKVGVCTKLTSPWKGPAVIVKVLDDVHYKDKNGSST SQMPPKQHTCWICHEVFTNARDMKNHMSSVIHSVLQRKQPRHSSVESESRFVPDYEASTPPEKRSRREYDPEYPASMLWA EGSPMLWYKISISKKVFASSKDLSSLCRRISLCKSAVIDPPSKFRPYGDRKSKLRDAAAKTLGMSSKYISEIGFATAVEF EITPISTTTRNTSCPSSELPSSNNITDATKTANKDNDDPANNKVEEKARQMHAELVSVATENSTTPAPDVANTGEADNQP VATVEPALFAPNNITGSEGTCIKETPTKEVVPTMISVAVESSEPNESCPSEDGNDDASKVDAISTDVSLVQGTNHPPLSP VQFATEEIQPMEAVDRVLSPPSPFADTVFAHDEQSNFPCIGPLSTCSVTSSPVKSSQPTTQNPNTQAKEILSLGCMPLCP PARRNWDREIPSTRGNIALTWPPYKWCQMSPDQKLLQWEYASMRFEQEKSDCCSLERGELLDKYNFLALPGSNIPPYDSP MRKARYYTYETLRTSPSAELLKQMLLAREARDTSVDDLIQTXGALVFLIFMKNGNHGNIIMLISPTRAEYLVFTVIIAML MSFYLTNED |
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