Gene
| Gene Model ID | pfu_aug2.0_1220.1_01479 |
|---|---|
| Locus | scaffold1220.1 : 1 ... 38010 : + |
| To GenomeBrowser | scaffold1220.1:1..38010 |
| Genes list of scaffold | scaffold1220.1 |
| Synonym | pfu_aug1.0_61237.1_48943 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1220.1_01479.t1 | 2 | 1 | Lectin_C | 12 | 61 | 1.4e-21 | 77.0 | 1.3e-08 | 4.8e-05 | 23.9 |
| pfu_aug2.0_1220.1_01479.t1 | 2 | 2 | Lectin_C | 119 | 222 | 1.4e-21 | 77.0 | 5.7e-17 | 2.1e-13 | 50.8 |
| pfu_aug2.0_1220.1_01479.t1 | 2 | 1 | An_peroxidase | 361 | 502 | 2.7e-32 | 111.8 | 2.3e-35 | 8.7e-32 | 110.1 |
| pfu_aug2.0_1220.1_01479.t1 | 2 | 2 | An_peroxidase | 505 | 530 | 2.7e-32 | 111.8 | 0.043 | 160.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1220.1_01479.t1 | gi|260791285|ref|XP_002590670.1| | hypothetical protein BRAFLDRAFT_125550 [Branchiostoma floridae] | 2.0e-24 |
| pfu_aug2.0_1220.1_01479.t1 | gi|17536077|ref|NP_496407.1| | T06D8.10 [Caenorhabditis elegans] | 2.0e-24 |
| pfu_aug2.0_1220.1_01479.t1 | gi|268532054|ref|XP_002631155.1| | Hypothetical protein CBG02940 [Caenorhabditis briggsae] | 1.0e-23 |
| pfu_aug2.0_1220.1_01479.t1 | gi|328700364|ref|XP_001946672.2| | PREDICTED: chorion peroxidase-like [Acyrthosiphon pisum] | 2.0e-23 |
| pfu_aug2.0_1220.1_01479.t1 | gi|308509268|ref|XP_003116817.1| | hypothetical protein CRE_01767 [Caenorhabditis remanei] | 3.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1220.1_01479.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1220.1_01479.t1 ggtagactactttgttcaggatgaatggatgtatgtctctaacgaggaacttattcagagctcaaactggcgcacgggtg aaccaaacagcgccgggaaagaagactgtgcggatatagagccaccgaccggcatgtgggcagacgtccgatgtgaaaga caactaaacttcatttgtgaaaaaccaatagtagttaaagaagatcctgaccataatctcaacagcactcacgcactcac aatagagcacataattgagcatcgacggactcctaacaagctagaggtgggaccaggatgtccaaacggatggatacagt tcggggaaaaatgttatttcttcagtgattttcctgaaacattcgccgatgccgggagctactgtcagatatcaggttcc aagctggctgagccgttaaccgacaatgaaatcgcatttttgaaacacgaagtaattcagaagaaggtgaggttctttat tggcgttgttgattactttattgagggggtgtgggaatatgcctctagtttattacccatacagagtaaagactggggac agaacgaacctaacagtgctggcaatgaagactgtgtagaaattgtgccttcgggagtttgggctgacgtcacttgtgaa aggcatctcaactttatttgcgaaagacccatacatatgcggatccttgctataaccgttatatttatgttctgtgggac aaaaggagatgtcacaattggtcatgctgtgattgaggattgtttgcaatacggaatatactgtatgaggaagtttgaaa cggaatgtaacataaatcatgaacagagcatgaggaatgccaagcagaagacagcagcttacctccatgacatctttatt aatggtccacctacatcagattttgatcataatatacatgatgcaattaggggagtttttgcatcgaagaagctttgcga aagaacaaaaatgtcagcagaaaaattaaaggacatagaagacgttatcatagaatggcggaacaaattcggcgcgggaa ataacatcagaccatcttgctcagatatcgactatgtgcaacgacggattgacggagcttgtaataatctacgtcatcct gaatgggggatgagttcacagcctcaaccacgatggctgaaaccggagtacgatgatgggatagagagtccgagatcacg tggtatcaatggtcttcccctacccaacccaagggagatcagcaataaattatttcagtcggagacaggaacagacgaca aagcggacctagatagaactatattggtcatgcattacggacagcttctggaccatgatttatcattgacaccagttctc atgtgcccaggtggtgctactatagactgttgtaactcgaaagagaacagaatggaatgcttacctatacaagtgccaaa ggatgatatgttctttaccacacagaagtgtataaactttgtccggtcggagcctgccaatcttccctatccatagcaac ttaattccataaaacgcatgcgcatgtcaaagattttatgtcagactactgggttagaaaccttacagccatgggtgctt gagccgattaactgtaggcaatactcagccaaacaaagaaacttgtatcatagttga |
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Protein
| Protein ID | pfu_aug2.0_1220.1_01479.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1220.1_01479.t1 VDYFVQDEWMYVSNEELIQSSNWRTGEPNSAGKEDCADIEPPTGMWADVRCERQLNFICEKPIVVKEDPDHNLNSTHALT IEHIIEHRRTPNKLEVGPGCPNGWIQFGEKCYFFSDFPETFADAGSYCQISGSKLAEPLTDNEIAFLKHEVIQKKVRFFI GVVDYFIEGVWEYASSLLPIQSKDWGQNEPNSAGNEDCVEIVPSGVWADVTCERHLNFICERPIHMRILAITVIFMFCGT KGDVTIGHAVIEDCLQYGIYCMRKFETECNINHEQSMRNAKQKTAAYLHDIFINGPPTSDFDHNIHDAIRGVFASKKLCE RTKMSAEKLKDIEDVIIEWRNKFGAGNNIRPSCSDIDYVQRRIDGACNNLRHPEWGMSSQPQPRWLKPEYDDGIESPRSR GINGLPLPNPREISNKLFQSETGTDDKADLDRTILVMHYGQLLDHDLSLTPVLMCPGGATIDCCNSKENRMECLPIQVPK DDMFFTTQKCINFVRSEPANLPYPXQLNSIKRMRMSKILCQTTGLETLQPWVLEPINCRQYSAKQRNLYHS |
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