Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1220.1_01484
Locus scaffold1220.1 : 127765 ... 151275 : -
To GenomeBrowser scaffold1220.1:127765..151275
Genes list of scaffold scaffold1220.1
Synonym pfu_aug1.0_8854.1_17379

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1220.1_01484.t1 gi|585698550|ref|XP_006822604.1| PREDICTED: histidine-rich glycoprotein-like [Saccoglossus kowalevskii] 1.0e-19
pfu_aug2.0_1220.1_01484.t1 gi|156398670|ref|XP_001638311.1| predicted protein [Nematostella vectensis] 2.0e-11
pfu_aug2.0_1220.1_01484.t1 gi|449467763|ref|XP_004151592.1| 2.0e-11
pfu_aug2.0_1220.1_01484.t1 gi|585651853|ref|XP_006814812.1| PREDICTED: A-kinase anchor protein 5-like [Saccoglossus kowalevskii] 4.0e-11
pfu_aug2.0_1220.1_01484.t1 gi|242016917|ref|XP_002428941.1| Circumsporozoite protein precursor, putative [Pediculus humanus corporis] 5.0e-11

Transcript
Transcript IDpfu_aug2.0_1220.1_01484.t1
Definition-
>pfu_aug2.0_1220.1_01484.t1
atgttagggtacctcgtcaggataatgttagggtatctcgtcaggataatgttagggtatctcgtcaggataatgttagg
gtatctcgtcaggataatgttagggtacctcgtcaggataatgttagggtgcctcgtcaggataatgttagggtatctca
tcaggataatgttagggtacctcttcaggataatgttagggtatctcatcaggataatgctagggtacctcgtcaggata
atgttagggtacctcgtcaggataatgttagggtacctcgtcaggataatttcncaggataatgtaagggtacctcgtca
ggataatgatagggtacctcgtcaggataatgttagggtacctcgtcaggataatgttagggtacctcgacaggataatg
ttagggtacctcgacaggataatgttagggtacctcgtcaggataatgtcagggtaccttgtcaggataatgttagggta
cctcgtcaggataatgttaggtatgtgctctgctggctgaagcgagctcaagacaaatcacccgagaagtctgaccgact
ttcagataggacagagaatcaagccaagtcttctctgacgagatttcaacaaggcccatcatggagtcccgtcgtagttg
accagtgtacaacgttggaaaagacattgttacaaaactgatgtcggaatagtctggaatatagctaccttaaagaagac
tcgttatacaggaaaaatcagcttcctaagagattgaaagagagaaggggatctccaacaacacatggatacagtaccta
cagcagaacaccaaaacatcccatacaaaaacacagagttggcatgcatagcaagagacgcaacgggaaaggaacacaaa
aacccccacagacacatcaggcacaaaagaccacacataaaccaactattgagaacacgagaaataatatggttatacat
gtatgcgataaacatcacccttaccaacaaaacatagaaggaaacagaaaaatattacaacgctataaaatttga

Protein
Protein IDpfu_aug2.0_1220.1_01484.t1
Definition-
>pfu_aug2.0_1220.1_01484.t1
MLGYLVRIMLGYLVRIMLGYLVRIMLGYLVRIMLGYLVRIMLGCLVRIMLGYLIRIMLGYLFRIMLGYLIRIMLGYLVRI
MLGYLVRIMLGYLVRIIXQDNVRVPRQDNDRVPRQDNVRVPRQDNVRVPRQDNVRVPRQDNVRVPRQDNVRVPCQDNVRV
PRQDNVRYVLCWLKRAQDKSPEKSDRLSDRTENQAKSSLTRFQQGPSWSPVVVDQCTTLEKTLLQNXCRNSLEYSYLKED
SLYRKNQLPKRLKERRGSPTTHGYSTYSRTPKHPIQKHRVGMHSKRRNGKGTQKPPQTHQAQKTTHKPTIENTRNNMVIH
VCDKHHPYQQNIEGNRKILQRYKI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495