Gene
| Gene Model ID | pfu_aug2.0_1224.1_14881 |
|---|---|
| Locus | scaffold1224.1 : 34826 ... 41028 : + |
| To GenomeBrowser | scaffold1224.1:34826..41028 |
| Genes list of scaffold | scaffold1224.1 |
| Synonym | pfu_aug1.0_1173.1_22476 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1224.1_14881.t1 | 1 | 1 | Glyco_transf_49 | 6 | 184 | 7.6e-37 | 127.0 | 5.90003e-41 | 8.7e-37 | 126.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1224.1_14881.t1 | gi|558193355|ref|XP_006129820.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase, partial [Pelodiscus sinensis] | 2.0e-26 |
| pfu_aug2.0_1224.1_14881.t1 | gi|602676642|ref|XP_007443782.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase [Python bivittatus] | 2.0e-25 |
| pfu_aug2.0_1224.1_14881.t1 | gi|641793432|ref|XP_008177941.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase [Chrysemys picta bellii] | 6.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_1224.1_14881.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1224.1_14881.t1 atggctctttgttttacgaagatcaattgtgatgcatttggtgccaaattgaaagaaagtcctatgtacatgagaccact gaaaggaatgtcttacccacataattcactcaggaatttggcaacacctacaaatggaaatggatatgtctttcacatcg acatagatatgattccgtcgtttaatctccacgaagaattcttgaaatatgctgaaactctcgataatcgaatcttggaa tcttccattttcattgtgccagcttttgaatacaaacatcacactgatgatatacccaggaccaaacttgaactaatgca aagatctgtgaatagagaaatccgaacgttctatagtaaggcatgctggaagtgccagtttaacacaaattatcggaaat ggaaatacctgaagacaaagacaatgacaacgtacgacatagagtcgaaattttacaattatgaaccatactacatagtg agggctgaccgattcataccgtacgatgaaaggtttttaggaagaggttatgacagaataagtcaggttctatcttaa |
|
Protein
| Protein ID | pfu_aug2.0_1224.1_14881.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1224.1_14881.t1 MALCFTKINCDAFGAKLKESPMYMRPLKGMSYPHNSLRNLATPTNGNGYVFHIDIDMIPSFNLHEEFLKYAETLDNRILE SSIFIVPAFEYKHHTDDIPRTKLELMQRSVNREIRTFYSKACWKCQFNTNYRKWKYLKTKTMTTYDIESKFYNYEPYYIV RADRFIPYDERFLGRGYDRISQVLS |
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