Gene
| Gene Model ID | pfu_aug2.0_1224.1_14882 |
|---|---|
| Locus | scaffold1224.1 : 42946 ... 60925 : + |
| To GenomeBrowser | scaffold1224.1:42946..60925 |
| Genes list of scaffold | scaffold1224.1 |
| Synonym | pfu_aug1.0_1173.1_22478 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fatty acid desaturase 2 | GO:0005488 GO:0006629 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1224.1_14882.t1 | 4 | 1 | Glyco_transf_49 | 95 | 149 | 6.7e-13 | 48.4 | 3.8e-12 | 1.1e-08 | 34.5 |
| pfu_aug2.0_1224.1_14882.t1 | 4 | 2 | Glyco_transf_49 | 148 | 181 | 6.7e-13 | 48.4 | 3.7e-06 | 0.011 | 14.8 |
| pfu_aug2.0_1224.1_14882.t1 | 4 | 3 | Glyco_transf_49 | 197 | 228 | 6.7e-13 | 48.4 | 0.034 | 100.0 | 1.8 |
| pfu_aug2.0_1224.1_14882.t1 | 2 | 1 | Cyt-b5 | 220 | 238 | 1.3e-25 | 88.9 | 0.84 | 2500.0 | -1.7 |
| pfu_aug2.0_1224.1_14882.t1 | 2 | 2 | Cyt-b5 | 264 | 338 | 1.3e-25 | 88.9 | 8.8e-29 | 2.6e-25 | 88.0 |
| pfu_aug2.0_1224.1_14882.t1 | 2 | 1 | FA_desaturase | 357 | 376 | 8.60397e-43 | 146.6 | 1.0 | 3100.0 | -2.7 |
| pfu_aug2.0_1224.1_14882.t1 | 2 | 2 | FA_desaturase | 398 | 653 | 8.60397e-43 | 146.6 | 0.0 | 8.60397e-43 | 146.6 |
| pfu_aug2.0_1224.1_14882.t1 | 4 | 4 | Glyco_transf_49 | 600 | 623 | 6.7e-13 | 48.4 | 0.82 | 2400.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1224.1_14882.t1 | gi|524872854|ref|XP_005093182.1| | PREDICTED: fatty acid desaturase 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1224.1_14882.t1 | gi|676446899|ref|XP_009051231.1| | hypothetical protein LOTGIDRAFT_143229 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1224.1_14882.t1 | gi|556742601|ref|XP_005966822.1| | PREDICTED: fatty acid desaturase 2 [Pantholops hodgsonii] | 0.0 |
| pfu_aug2.0_1224.1_14882.t1 | gi|594037810|ref|XP_006043531.1| | PREDICTED: fatty acid desaturase 2 [Bubalus bubalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1224.1_14882.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1224.1_14882.t1 atgagttcctgtctcaaacgaaacgtcaaatatttcgtcaatttactgattgaaaaagaagaaatgatgtcgtcaacaac tctagtttccttagttgtaattgcgtgtattgtaacatgcgagtcattggcagaaacggatatatcctccaaagcgatga atatggtttcgaagtttaaaattagtactaaagctggcgatataccatttatccgccgaaaagatgttctcaagtctgaa tattctgaagacattgaacgagaaggactaaatggacaagaaaccgtaactttgatatctcactgttctattgaaaatct acattttgtggaatctattgcagcaagttgggatggccctgtatcaattgcagtgtttattgatagaaatgatgtggaat ttatcagactagtcaaatattatcatcaatgttataaacacgttagcgaggtgtggatggcggggttccgatttttagta ctcaccgatggtttcctggttcacagaggatttcattatttggaaaaaccacgtagagcgaagtgcccaatcagaaagag aagagaagacgttgacaagtgtctcaaaaaacgagaaaaggacattttctcgcaaattgtattcgaaattaacgaaaagc ggcattttaatcggaaccggaaagaggaacttcgtaaaatggatgcggagagcaaattttggctattgatagaagatccg aaacgagaggccttcaggatggggaaagaggggactgcctgcgaaaatggtgttgccaaagttccagtctacctcacgat ggaggaagtcagcaagcatgactcggctaaagacaactggttgatgatcgatggcaaagtttacgatttgagtagatggg caaagaaacatcccggtggagccaaaatccttggacattttgccggtcaagatgccactgatgcatggacggcatttcac aacgacaaggattttgtatccaagtacatgaaggccctgtatgtaggggatgttaaagactggagagagactgagattaa gaaggacttcagagagctcaggaagcacgtagaggatagtggatggatgaaagtcaaccctggtttcttcagcttccatc tagctcacatcatagcgttagagatcctggcttatttcctgatcagttatatgggaggagggatgtcgtcattcttactc ggtgcaataatcctcgccacggctcaggctcaggccggctggacacagcatgactatggacatatgtcagtgtttaaaag ccataagatgaatcacatcttccaccatcttgtgattggtcatctaaaggcagcatcatctcattggtggaatttccgtc acttccaacaccatgctaagcctaacattctgaacaaggaccctgacgtagatatcgcctatctatttgtactgggagat agagttcccagagcttggggtctgaggaaaaaaggattcatgccatataatttccaacaaagctatttcttcttcatcgg tccaccattactgctgcctatatatttccacatagagaatatcctgttcgtcttcaaaagaaaagactgggttgacctac tgatgacggtgtcattcttctttagatttttctggctctacgcgcctttctttggaggctggggaacatttgcattctac atgttcattagattcctggagagccattggtttacatgggtgacccagatgagtcatctccccctaagaattgacaagga agctgacgaggattggttctcgagtcaactgtacaccacgtgtaacgtagattccagtcccttcaatgattggttcacag gacacttaaacttccagatcgagcatcatctgttcccgaccatgcctcgtcacaatctacataaggtagctccgttagtg agatcaatgtgtaagaagcatggattgccgtatagaattaaaccactgctcggagcattcggtgatatagtatcatctct gaagaaatctggagaaatctggtatgaggcttacacccagggataa |
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Protein
| Protein ID | pfu_aug2.0_1224.1_14882.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1224.1_14882.t1 MSSCLKRNVKYFVNLLIEKEEMMSSTTLVSLVVIACIVTCESLAETDISSKAMNMVSKFKISTKAGDIPFIRRKDVLKSE YSEDIEREGLNGQETVTLISHCSIENLHFVESIAASWDGPVSIAVFIDRNDVEFIRLVKYYHQCYKHVSEVWMAGFRFLV LTDGFLVHRGFHYLEKPRRAKCPIRKRREDVDKCLKKREKDIFSQIVFEINEKRHFNRNRKEELRKMDAESKFWLLIEDP KREAFRMGKEGTACENGVAKVPVYLTMEEVSKHDSAKDNWLMIDGKVYDLSRWAKKHPGGAKILGHFAGQDATDAWTAFH NDKDFVSKYMKALYVGDVKDWRETEIKKDFRELRKHVEDSGWMKVNPGFFSFHLAHIIALEILAYFLISYMGGGMSSFLL GAIILATAQAQAGWTQHDYGHMSVFKSHKMNHIFHHLVIGHLKAASSHWWNFRHFQHHAKPNILNKDPDVDIAYLFVLGD RVPRAWGLRKKGFMPYNFQQSYFFFIGPPLLLPIYFHIENILFVFKRKDWVDLLMTVSFFFRFFWLYAPFFGGWGTFAFY MFIRFLESHWFTWVTQMSHLPLRIDKEADEDWFSSQLYTTCNVDSSPFNDWFTGHLNFQIEHHLFPTMPRHNLHKVAPLV RSMCKKHGLPYRIKPLLGAFGDIVSSLKKSGEIWYEAYTQG |
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