Gene
| Gene Model ID | pfu_aug2.0_1224.1_14883 |
|---|---|
| Locus | scaffold1224.1 : 71626 ... 91665 : - |
| To GenomeBrowser | scaffold1224.1:71626..91665 |
| Genes list of scaffold | scaffold1224.1 |
| Synonym | pfu_aug1.0_25410.1_26245 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1224.1_14883.t1 | 7 | 1 | WD40 | 5 | 21 | 7.0e-37 | 124.0 | 7.3e-05 | 0.18 | 11.7 |
| pfu_aug2.0_1224.1_14883.t1 | 3 | 1 | Nup160 | 6 | 31 | 1.6e-06 | 26.5 | 0.00031 | 0.78 | 7.8 |
| pfu_aug2.0_1224.1_14883.t1 | 7 | 2 | WD40 | 25 | 77 | 7.0e-37 | 124.0 | 1.4e-08 | 3.3e-05 | 23.5 |
| pfu_aug2.0_1224.1_14883.t1 | 3 | 2 | Nup160 | 55 | 90 | 1.6e-06 | 26.5 | 6.5e-05 | 0.16 | 10.0 |
| pfu_aug2.0_1224.1_14883.t1 | 7 | 3 | WD40 | 81 | 119 | 7.0e-37 | 124.0 | 1.3e-13 | 3.2e-10 | 39.4 |
| pfu_aug2.0_1224.1_14883.t1 | 7 | 4 | WD40 | 125 | 158 | 7.0e-37 | 124.0 | 1.7e-08 | 4.1e-05 | 23.2 |
| pfu_aug2.0_1224.1_14883.t1 | 7 | 5 | WD40 | 163 | 180 | 7.0e-37 | 124.0 | 0.00031 | 0.77 | 9.7 |
| pfu_aug2.0_1224.1_14883.t1 | 7 | 6 | WD40 | 186 | 196 | 7.0e-37 | 124.0 | 0.3 | 750.0 | 0.2 |
| pfu_aug2.0_1224.1_14883.t1 | 7 | 7 | WD40 | 204 | 236 | 7.0e-37 | 124.0 | 4.4e-09 | 1.1e-05 | 25.1 |
| pfu_aug2.0_1224.1_14883.t1 | 3 | 3 | Nup160 | 223 | 239 | 1.6e-06 | 26.5 | 0.033 | 82.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1224.1_14883.t1 | gi|676434912|ref|XP_009047386.1| | hypothetical protein LOTGIDRAFT_53521, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1224.1_14883.t1 | gi|585721433|ref|XP_006813266.1| | PREDICTED: WD repeat-containing protein 86-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1224.1_14883.t1 | gi|390355379|ref|XP_003728536.1| | PREDICTED: WD repeat-containing protein 86 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1224.1_14883.t1 | gi|156407340|ref|XP_001641502.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1224.1_14883.t1 | gi|675886976|ref|XP_009028990.1| | hypothetical protein HELRODRAFT_108086 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1224.1_14883.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1224.1_14883.t1 atgatttgtacgggtgactttattttctccagttcctacgatagaacggctagatgctgggactttgacaatggcgagtg tttgagagtttttcgaggtcacaaacgcggtgtttacccgctaattttcatcccagcagacgatgatgacaatacggacg acctcgatcccgacgcgaataaagacttactgatcactggatctgcggattcgaccgcccgatcttggaattttgaaact gggcagtgtctacaggtgtttaagggacatacaggggcggtaacctgcatggcaaccgataatctcggacgaattctctt caccggaagtgtggacttcaccatcagaagttgggatctgcttaaaggtgtacaaatgaaagtgttcgaggggcatactg gatcagtcatctgtatgcaggttgtgaacaagatcatgtacacaggaagttccgatcacacagcgcgcgcatgggtaacg gagtttggagattgtactagaatattcaaaggccataaacacactgtcagtgtcatcaaagtaaaagagggacttggatc gggggatggaagtgtgagatcgtatgaccctaaatcgggaggtattagaaaggtattcaacggtcatgattttgccgtta cagcatttgagctggttgacgggaagctgttcaccggctcgtatgacgggaatctgaaaatctgggactcgactggtatt aaggacgacacgacgttcggtaaagatgaaaaggatgtgaaagagaaggagaaagaacagaaactggacaagaaccagaa tgggatcgataacgaggctagaattacactagacgattaa |
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Protein
| Protein ID | pfu_aug2.0_1224.1_14883.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1224.1_14883.t1 MICTGDFIFSSSYDRTARCWDFDNGECLRVFRGHKRGVYPLIFIPADDDDNTDDLDPDANKDLLITGSADSTARSWNFET GQCLQVFKGHTGAVTCMATDNLGRILFTGSVDFTIRSWDLLKGVQMKVFEGHTGSVICMQVVNKIMYTGSSDHTARAWVT EFGDCTRIFKGHKHTVSVIKVKEGLGSGDGSVRSYDPKSGGIRKVFNGHDFAVTAFELVDGKLFTGSYDGNLKIWDSTGI KDDTTFGKDEKDVKEKEKEQKLDKNQNGIDNEARITLDD |
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