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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1224.1_14884
Locus scaffold1224.1 : 96886 ... 124806 : +
To GenomeBrowser scaffold1224.1:96886..124806
Genes list of scaffold scaffold1224.1
Synonym pfu_aug1.0_784.1_29427

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1224.1_14884.t1 2 1 AAA_16 473 607 2.0e-07 31.1 3.9e-09 2.6e-06 27.5
pfu_aug2.0_1224.1_14884.t1 1 1 NACHT 491 647 5.6e-09 35.8 1.6e-11 1.1e-08 34.9
pfu_aug2.0_1224.1_14884.t1 1 1 AAA_22 491 604 1.9e-06 28.0 1.5e-08 1.0e-05 25.6
pfu_aug2.0_1224.1_14884.t1 9 1 TPR_17 873 890 3.3e-11 42.4 8.7 5900.0 -2.1
pfu_aug2.0_1224.1_14884.t1 9 1 TPR_7 883 902 4.7e-35 116.6 6.0 4000.0 -2.0
pfu_aug2.0_1224.1_14884.t1 7 1 TPR_16 893 951 2.5e-18 66.2 0.0041 2.8 8.7
pfu_aug2.0_1224.1_14884.t1 9 2 TPR_17 909 931 3.3e-11 42.4 3.5 2300.0 -0.8
pfu_aug2.0_1224.1_14884.t1 6 1 TPR_12 910 984 0.0 245.3 8.4e-18 5.6e-15 55.0
pfu_aug2.0_1224.1_14884.t1 9 1 TPR_10 912 951 0.0 199.8 1.6e-06 0.0011 18.8
pfu_aug2.0_1224.1_14884.t1 6 1 TPR_11 912 983 2.4e-35 119.9 2.5e-08 1.7e-05 24.3
pfu_aug2.0_1224.1_14884.t1 8 1 TPR_1 914 942 6.2e-40 133.2 0.0033 2.2 8.0
pfu_aug2.0_1224.1_14884.t1 7 1 TPR_8 914 942 1.6e-19 68.1 0.0019 1.3 8.9
pfu_aug2.0_1224.1_14884.t1 8 1 TPR_2 915 941 2.4e-23 80.1 0.11 76.0 3.6
pfu_aug2.0_1224.1_14884.t1 7 1 TPR_14 915 953 1.5e-16 59.3 0.0038 2.6 8.9
pfu_aug2.0_1224.1_14884.t1 9 2 TPR_7 917 943 4.7e-35 116.6 0.15 98.0 3.1
pfu_aug2.0_1224.1_14884.t1 7 2 TPR_16 918 984 2.5e-18 66.2 0.0038 2.6 8.8
pfu_aug2.0_1224.1_14884.t1 3 1 DUF2225 929 1007 1.2e-06 28.1 0.01 7.0 6.0
pfu_aug2.0_1224.1_14884.t1 5 1 TPR_19 930 982 3.4e-11 43.3 0.2 140.0 2.9
pfu_aug2.0_1224.1_14884.t1 9 3 TPR_17 944 974 3.3e-11 42.4 2.1 1400.0 -0.1
pfu_aug2.0_1224.1_14884.t1 9 2 TPR_10 953 992 0.0 199.8 0.0015 1.0 9.3
pfu_aug2.0_1224.1_14884.t1 8 2 TPR_1 954 983 6.2e-40 133.2 3.2e-05 0.022 14.3
pfu_aug2.0_1224.1_14884.t1 8 2 TPR_2 954 984 2.4e-23 80.1 0.012 8.2 6.6
pfu_aug2.0_1224.1_14884.t1 7 2 TPR_8 955 983 1.6e-19 68.1 0.0003 0.2 11.5
pfu_aug2.0_1224.1_14884.t1 9 3 TPR_7 957 987 4.7e-35 116.6 5.2e-05 0.035 13.9
pfu_aug2.0_1224.1_14884.t1 7 2 TPR_14 957 982 1.5e-16 59.3 0.27 180.0 3.1
pfu_aug2.0_1224.1_14884.t1 7 3 TPR_16 963 984 2.5e-18 66.2 2.0 1400.0 0.1
pfu_aug2.0_1224.1_14884.t1 5 2 TPR_19 968 986 3.4e-11 43.3 0.3 200.0 2.3
pfu_aug2.0_1224.1_14884.t1 6 2 TPR_12 986 1028 0.0 245.3 1.3e-06 0.00086 19.1
pfu_aug2.0_1224.1_14884.t1 6 2 TPR_11 996 1027 2.4e-35 119.9 0.23 150.0 2.0
pfu_aug2.0_1224.1_14884.t1 8 3 TPR_2 996 1016 2.4e-23 80.1 0.52 350.0 1.5
pfu_aug2.0_1224.1_14884.t1 9 3 TPR_10 999 1029 0.0 199.8 2.3e-05 0.015 15.1
pfu_aug2.0_1224.1_14884.t1 9 4 TPR_7 999 1023 4.7e-35 116.6 0.029 19.0 5.3
pfu_aug2.0_1224.1_14884.t1 9 4 TPR_17 1001 1016 3.3e-11 42.4 1.4 950.0 0.4
pfu_aug2.0_1224.1_14884.t1 8 3 TPR_1 1002 1016 6.2e-40 133.2 0.11 77.0 3.1
pfu_aug2.0_1224.1_14884.t1 6 3 TPR_12 1044 1094 0.0 245.3 7.2e-14 4.9e-11 42.4
pfu_aug2.0_1224.1_14884.t1 9 4 TPR_10 1045 1061 0.0 199.8 5.8 3900.0 -2.1
pfu_aug2.0_1224.1_14884.t1 7 4 TPR_16 1053 1091 2.5e-18 66.2 4.0e-05 0.027 15.1
pfu_aug2.0_1224.1_14884.t1 9 5 TPR_17 1059 1083 3.3e-11 42.4 0.0035 2.3 8.6
pfu_aug2.0_1224.1_14884.t1 9 5 TPR_10 1062 1102 0.0 199.8 4.4e-10 2.9e-07 30.1
pfu_aug2.0_1224.1_14884.t1 6 3 TPR_11 1062 1134 2.4e-35 119.9 2.6e-11 1.8e-08 33.9
pfu_aug2.0_1224.1_14884.t1 8 4 TPR_1 1063 1093 6.2e-40 133.2 1.2e-07 8.3e-05 22.0
pfu_aug2.0_1224.1_14884.t1 8 4 TPR_2 1063 1092 2.4e-23 80.1 1.5e-06 0.001 18.8
pfu_aug2.0_1224.1_14884.t1 7 3 TPR_8 1064 1093 1.6e-19 68.1 0.0026 1.7 8.5
pfu_aug2.0_1224.1_14884.t1 9 5 TPR_7 1065 1097 4.7e-35 116.6 5.7e-07 0.00038 20.0
pfu_aug2.0_1224.1_14884.t1 7 3 TPR_14 1066 1095 1.5e-16 59.3 0.013 9.0 7.2
pfu_aug2.0_1224.1_14884.t1 7 5 TPR_16 1069 1134 2.5e-18 66.2 2.5e-06 0.0017 19.0
pfu_aug2.0_1224.1_14884.t1 5 3 TPR_19 1076 1133 3.4e-11 43.3 1.9e-05 0.013 15.8
pfu_aug2.0_1224.1_14884.t1 6 4 TPR_12 1097 1135 0.0 245.3 8.2e-11 5.5e-08 32.6
pfu_aug2.0_1224.1_14884.t1 9 6 TPR_10 1104 1143 0.0 199.8 9.5e-14 6.4e-11 41.8
pfu_aug2.0_1224.1_14884.t1 6 4 TPR_11 1104 1139 2.4e-35 119.9 2.0e-07 0.00014 21.4
pfu_aug2.0_1224.1_14884.t1 8 5 TPR_1 1105 1135 6.2e-40 133.2 1.7e-08 1.1e-05 24.7
pfu_aug2.0_1224.1_14884.t1 8 5 TPR_2 1105 1134 2.4e-23 80.1 0.00038 0.25 11.3
pfu_aug2.0_1224.1_14884.t1 9 6 TPR_17 1105 1125 3.3e-11 42.4 0.0093 6.3 7.2
pfu_aug2.0_1224.1_14884.t1 7 4 TPR_8 1106 1134 1.6e-19 68.1 0.00099 0.67 9.8
pfu_aug2.0_1224.1_14884.t1 9 6 TPR_7 1107 1135 4.7e-35 116.6 5.8e-07 0.00039 19.9
pfu_aug2.0_1224.1_14884.t1 3 2 DUF2225 1108 1181 1.2e-06 28.1 5.7e-05 0.038 13.4
pfu_aug2.0_1224.1_14884.t1 7 4 TPR_14 1109 1134 1.5e-16 59.3 0.00043 0.29 11.8
pfu_aug2.0_1224.1_14884.t1 6 5 TPR_12 1143 1220 0.0 245.3 1.1e-24 7.5e-22 77.0
pfu_aug2.0_1224.1_14884.t1 9 7 TPR_10 1147 1186 0.0 199.8 5.3e-12 3.6e-09 36.2
pfu_aug2.0_1224.1_14884.t1 6 5 TPR_11 1147 1218 2.4e-35 119.9 1.8e-13 1.2e-10 40.8
pfu_aug2.0_1224.1_14884.t1 8 6 TPR_1 1151 1179 6.2e-40 133.2 9.6e-10 6.5e-07 28.7
pfu_aug2.0_1224.1_14884.t1 9 7 TPR_7 1152 1180 4.7e-35 116.6 7.2e-07 0.00048 19.7
pfu_aug2.0_1224.1_14884.t1 8 6 TPR_2 1152 1178 2.4e-23 80.1 2.9e-06 0.002 17.9
pfu_aug2.0_1224.1_14884.t1 7 5 TPR_14 1152 1187 1.5e-16 59.3 0.00015 0.1 13.2
pfu_aug2.0_1224.1_14884.t1 9 7 TPR_17 1152 1167 3.3e-11 42.4 0.092 62.0 4.1
pfu_aug2.0_1224.1_14884.t1 7 5 TPR_8 1153 1178 1.6e-19 68.1 1.9e-06 0.0013 18.3
pfu_aug2.0_1224.1_14884.t1 7 6 TPR_16 1153 1221 2.5e-18 66.2 4.2e-09 2.8e-06 27.8
pfu_aug2.0_1224.1_14884.t1 5 4 TPR_19 1158 1221 3.4e-11 43.3 2.8e-07 0.00019 21.6
pfu_aug2.0_1224.1_14884.t1 9 8 TPR_17 1169 1208 3.3e-11 42.4 0.00028 0.19 12.0
pfu_aug2.0_1224.1_14884.t1 6 6 TPR_12 1185 1261 0.0 245.3 1.6e-21 1.0e-18 66.9
pfu_aug2.0_1224.1_14884.t1 2 2 AAA_16 1185 1223 2.0e-07 31.1 2.1 1400.0 -0.9
pfu_aug2.0_1224.1_14884.t1 3 3 DUF2225 1187 1259 1.2e-06 28.1 0.00079 0.53 9.7
pfu_aug2.0_1224.1_14884.t1 9 8 TPR_10 1188 1229 0.0 199.8 1.1e-12 7.5e-10 38.4
pfu_aug2.0_1224.1_14884.t1 8 7 TPR_1 1189 1221 6.2e-40 133.2 1.8e-08 1.2e-05 24.6
pfu_aug2.0_1224.1_14884.t1 8 7 TPR_2 1189 1221 2.4e-23 80.1 9.2e-07 0.00062 19.4
pfu_aug2.0_1224.1_14884.t1 7 6 TPR_8 1190 1219 1.6e-19 68.1 0.00021 0.14 11.9
pfu_aug2.0_1224.1_14884.t1 9 8 TPR_7 1191 1222 4.7e-35 116.6 9.7e-09 6.5e-06 25.5
pfu_aug2.0_1224.1_14884.t1 7 6 TPR_14 1191 1226 1.5e-16 59.3 0.0016 1.1 10.0
pfu_aug2.0_1224.1_14884.t1 7 7 TPR_16 1212 1261 2.5e-18 66.2 2.1e-05 0.014 16.0
pfu_aug2.0_1224.1_14884.t1 9 9 TPR_17 1212 1250 3.3e-11 42.4 0.033 22.0 5.5
pfu_aug2.0_1224.1_14884.t1 5 5 TPR_19 1212 1261 3.4e-11 43.3 0.017 11.0 6.4
pfu_aug2.0_1224.1_14884.t1 9 9 TPR_10 1230 1260 0.0 199.8 0.0027 1.8 8.6
pfu_aug2.0_1224.1_14884.t1 6 6 TPR_11 1230 1263 2.4e-35 119.9 3.3e-06 0.0022 17.5
pfu_aug2.0_1224.1_14884.t1 8 8 TPR_1 1231 1261 6.2e-40 133.2 3.4e-06 0.0023 17.4
pfu_aug2.0_1224.1_14884.t1 8 8 TPR_2 1231 1260 2.4e-23 80.1 7.8e-05 0.053 13.4
pfu_aug2.0_1224.1_14884.t1 7 7 TPR_8 1232 1262 1.6e-19 68.1 0.0028 1.9 8.4
pfu_aug2.0_1224.1_14884.t1 7 7 TPR_14 1232 1259 1.5e-16 59.3 0.26 170.0 3.2
pfu_aug2.0_1224.1_14884.t1 9 9 TPR_7 1233 1265 4.7e-35 116.6 0.00025 0.17 11.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1224.1_14884.t1 gi|524903465|ref|XP_005107932.1| PREDICTED: nephrocystin-3-like [Aplysia californica] 0.0
pfu_aug2.0_1224.1_14884.t1 gi|676478011|ref|XP_009061296.1| hypothetical protein LOTGIDRAFT_126945 [Lottia gigantea] 0.0
pfu_aug2.0_1224.1_14884.t1 gi|557274869|ref|XP_006020690.1| PREDICTED: nephrocystin-3 [Alligator sinensis] 0.0
pfu_aug2.0_1224.1_14884.t1 gi|564270287|ref|XP_006273906.1| PREDICTED: nephrocystin-3 [Alligator mississippiensis] 0.0
pfu_aug2.0_1224.1_14884.t1 gi|591379648|ref|XP_007064370.1| PREDICTED: nephrocystin-3 [Chelonia mydas] 0.0

Transcript
Transcript IDpfu_aug2.0_1224.1_14884.t1
Definition- 
>pfu_aug2.0_1224.1_14884.t1
atgggaactacagggtcatttttacgcaaccaagaggatgatgatattttgggaaacgaccttgacggaagcagtcatgg
ggtcattaagcggattcccgtggaaattaaacctcgcggaaagctgggcatcctcagtcagggctcgcgcaaagacaaaa
agatcggaggaagtcttcggtcggccttgtcggtcgacctggaaaacccggaggtggaaaagatcagaaaggaatttgaa
atgtacagactgaacaaagagaatgacataaccgacatgaagaagaaagaaacaaggcttcagatggagaataaacgact
gcgagcggaattactcgtactacagaaaacctgtacaaatctacgagcggagcgcgacaaagccattgaagcggaacatc
aatcccaggccagagctgctgccttccagagtgatcgagataaagtacagagaaatttcaagattttcagagaaaacatg
gagctccaattacaaacaatgttaagagataaacggaatttggagggtaaacttcacaagatagcccatgggtatactct
ggaggagaccgatatctcatcacgccctgattttgactcttcattaggaagccctaaccctggggactggtggacagccc
tggagagtgagccgtctatcagtaatgtgagtcaagtccagcagtccactttcagaggaccagagttagcacacagtatg
atggaaccagatggaccattcaataatatcaacagagaggactggagtacagtattagcaaacatgacacaagttcttcc
ccctgtaccggaacattccctcagcagtgttttacgtatatatatctcgtcacctcgagacactcatgtggaggtggaca
tactcaataaggagtattttccaagactttcatccttatgccagtctgcaggtcgtactttattacttattcacctaatg
gtcgatgataatactacgctcacccctcaggaatttcgtaatgtcacattgcttcgatttaccagtttagagtacaagta
cggatatctagataacccagtatcgaggtcttctattttctgttttagagaaacgaaaagtggtcgttcaagtaataacg
aggcaagagaactgaaattgaaagtaagagaaaaaggcggagctaaaatcattgatggttatacgtcccccaatcgtgga
gtagaacaagtcgtcatggaagtggagaagatgataaagaatgagttaggtgtggaccacaagtcagattgtgaggatgg
ggaggaagaaggagggggtgagacagacggacaggaacagatatgcggaggggctgtgtgggatccacttggagactacg
aacaaatggaggcatttaactacaccatcaagtctagctgtgaactgggatttgagaggcactatgaaagactaaatgga
catgtgtcatctgctggtctgttacctcccttgttaattcttggtccatcaggctcgggaaaatctctgctactttctaa
atggatccagttacaacaagagaagatgcctcctacccttgttttgtaccactttgttggtcaggaatcatcgatcagtg
ctgaccctatagtaatgattaggagacttacagctcagttgatgcagcaggtgaactctcctcccgccttgacagccgat
cccgttagattggtagaggaattccctcgctggctggaaaaagtttcggagaaaatgggtggagtcattctggtgctaga
tgcaatagataatttctcgcaagcggaggtccatttaaaatggctgcttgatccgttacctgttgatgttcgtatgattg
tatcatgtaatgataaaacctgtccacaggcatggaggtcctggcccacagtcagagttgaacctctgagtaataaaaac
gtgaaggagctaattcatgcagagttagctaccttggatgccgacatcggttcggaagatgggttgattctaactcactg
tagaacgccagctacgtgcagccctctctacgtaatggtgctaacgagacatatcgcaggatatatacgtcatgaaggga
agattggttcatacctagacgttttactcacctgtactgactgtgatagtttgtacgctaaagtacttgatttgtcaagg
gtagcgttagaaactcatgaatccaggggctttctcaaaagtatactgcggtatatctacgttagtcggagtgggcttag
tgaactagagcttatagacataattcctaacttaacatggaatttcctgtcaattttcaccgaggtcctctctgatcaca
tgatactcaaataccaagggggattactcatgtttgctcacgatcaagtgaagactgctgtacaggattactgctttggt
aaagacgaaactcgtctcgtgtcacagttacgtcaagatctcatcaaatatttctgtcatagcttaagccctggtactgt
cacttgtcgggtagcagatgaattgccatggttactcaaacaggaaggagataaagaaagcctagagagttgtattgtaa
atctctgtatattccagagactttatgcaaggggtaggtgtgcagaactgattagctattggcagtttatagctgctgac
aagaacagtatggcacaggcttactttaatgccactaggaaaatggaagagttggtgggacagtacaatggacttatcac
actgccaaggatagcggacatgtatgaatccctgggacggttcttgaaggatttaggtttactcaatcaggcagttcctt
cactacagagagcactagagatccgagagatttccctggaccctgatcaccctgttgtagccaggtcacatcaccagctt
gcagggctccatgcacagtggggtaaattctccacggccgaagaattctataaacaagccctggacatctatatagataa
atacggatcagatcattatcttgtggcaaaggaactggatgctcttgcagtactgtatcaaaaacaagataagcatgagc
tggcagaaccattgaagaagagagccatgtcgatcaggaagaaagtcaaaacaccaagagtgacttctggtcagatcaag
tcagtagtccaaagaagagctctccaattagaggagttagcaataggaccagattcaccagacctggcacgctcccttaa
tgagctgggtgtactgcattatctacaaaatgacttcgaggcagcagaatcattattcaaaagggcccttgaaatgaggg
aatccacactatcagctgatcacctagatgttgcccaatcactgaataacttggctgccttatacaatgataggagacag
tatgacaaggccgagccactgtatgatcgagctctacaaattagagtcaagcatcactccgtaaaccatgatagtgtagc
ctctgtgatcaaacatctggccttattgtataggaaacagggtaaattcgacaaggcagagccaatgtacaagaaagcaa
tagagatcagagagaaatcgttcggtcctgaacatccatctgtggccacagccttggtcaacctagccgttctttactca
caacagaataagtatacagaggcagatcctttgtataagagagcgttgaagatctacgaggacagtctgggagcccatca
tccacgagtggccgaaactttacgcaatctggctgtcatgaaatatgagatgaaagattttgagactgcagccaaattct
acaagagagctacagaaatcaaggacagtgaaaataattatggtgccaaaattatctcgagacgctgctctagtagtgat
acaaactctactgtaaaaaatattatgcagttgtga

Protein
Protein IDpfu_aug2.0_1224.1_14884.t1
Definition- 
>pfu_aug2.0_1224.1_14884.t1
MGTTGSFLRNQEDDDILGNDLDGSSHGVIKRIPVEIKPRGKLGILSQGSRKDKKIGGSLRSALSVDLENPEVEKIRKEFE
MYRLNKENDITDMKKKETRLQMENKRLRAELLVLQKTCTNLRAERDKAIEAEHQSQARAAAFQSDRDKVQRNFKIFRENM
ELQLQTMLRDKRNLEGKLHKIAHGYTLEETDISSRPDFDSSLGSPNPGDWWTALESEPSISNVSQVQQSTFRGPELAHSM
MEPDGPFNNINREDWSTVLANMTQVLPPVPEHSLSSVLRIYISSPRDTHVEVDILNKEYFPRLSSLCQSAGRTLLLIHLM
VDDNTTLTPQEFRNVTLLRFTSLEYKYGYLDNPVSRSSIFCFRETKSGRSSNNEARELKLKVREKGGAKIIDGYTSPNRG
VEQVVMEVEKMIKNELGVDHKSDCEDGEEEGGGETDGQEQICGGAVWDPLGDYEQMEAFNYTIKSSCELGFERHYERLNG
HVSSAGLLPPLLILGPSGSGKSLLLSKWIQLQQEKMPPTLVLYHFVGQESSISADPIVMIRRLTAQLMQQVNSPPALTAD
PVRLVEEFPRWLEKVSEKMGGVILVLDAIDNFSQAEVHLKWLLDPLPVDVRMIVSCNDKTCPQAWRSWPTVRVEPLSNKN
VKELIHAELATLDADIGSEDGLILTHCRTPATCSPLYVMVLTRHIAGYIRHEGKIGSYLDVLLTCTDCDSLYAKVLDLSR
VALETHESRGFLKSILRYIYVSRSGLSELELIDIIPNLTWNFLSIFTEVLSDHMILKYQGGLLMFAHDQVKTAVQDYCFG
KDETRLVSQLRQDLIKYFCHSLSPGTVTCRVADELPWLLKQEGDKESLESCIVNLCIFQRLYARGRCAELISYWQFIAAD
KNSMAQAYFNATRKMEELVGQYNGLITLPRIADMYESLGRFLKDLGLLNQAVPSLQRALEIREISLDPDHPVVARSHHQL
AGLHAQWGKFSTAEEFYKQALDIYIDKYGSDHYLVAKELDALAVLYQKQDKHELAEPLKKRAMSIRKKVKTPRVTSGQIK
SVVQRRALQLEELAIGPDSPDLARSLNELGVLHYLQNDFEAAESLFKRALEMRESTLSADHLDVAQSLNNLAALYNDRRQ
YDKAEPLYDRALQIRVKHHSVNHDSVASVIKHLALLYRKQGKFDKAEPMYKKAIEIREKSFGPEHPSVATALVNLAVLYS
QQNKYTEADPLYKRALKIYEDSLGAHHPRVAETLRNLAVMKYEMKDFETAAKFYKRATEIKDSENNYGAKIISRRCSSSD
TNSTVKNIMQL

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Okinawa Institute of Science and Technology
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