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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1229.1_31535
Locus scaffold1229.1 : 23956 ... 31450 : +
To GenomeBrowser scaffold1229.1:23956..31450
Genes list of scaffold scaffold1229.1
Synonym pfu_aug1.0_15022.1_32495

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1229.1_31535.t1 1 1 Amnionless 1 371 0.0 194.5 0.0 0.0 182.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1229.1_31535.t1 gi|153791327|ref|NP_001086069.2| amnion associated transmembrane protein precursor [Xenopus laevis] 1.0e-28
pfu_aug2.0_1229.1_31535.t1 gi|49256464|gb|AAH74152.1| MGC81896 protein [Xenopus laevis] 2.0e-28
pfu_aug2.0_1229.1_31535.t1 gi|291234438|ref|XP_002737155.1| PREDICTED: protein amnionless-like [Saccoglossus kowalevskii] 2.0e-28

Transcript
Transcript IDpfu_aug2.0_1229.1_31535.t1
Definition-
>pfu_aug2.0_1229.1_31535.t1
atgaatggagaagttgtgttcggagccaattcgatcctcgccttcacggacactcctgaccacagcgcttcgtgctctcc
ttatgacggagtggtggaattcaatgttacctacccacgtgactggttcgatccccggaactggtgccagacaagttcag
aaaccggaagttgtcagtcagtttccgttctagattctgaaagagtcccttgcagcagcgatgatgtggtgtttccgaga
gaaaattcttactttgttaatttggaatctaatgcaaatattaaactcaacactatcaagataacgggaaaggcaagtac
tgaattactttgtttatcgattgataaaaaatacgcattctgtgcatacactacaagtacgttccagacctttctgaaca
cggattccgggaaacgtatgttccctgttcctccagtcggtggtcgatcgactgttacagtccaaagacgaccgtgtaat
gatcctacaggatgtgcttgtgaaaatgaccaaacagagattttgaacaggatctgtaaaattcagacgcctcattgttc
caaagctcagtgtttaacagtgttaaagccgataggctcatgctgcgatctttgtggagctgtcttggtgatggaatacg
gagcagggtttaggatgtcaaacctcagagacggcttacacagaaacgtgctggataaatcagacgattataaagacgtg
aattatatagtgtctaaaacccataccggcgaaattcagatcgtcctgtcagatgtcaatgggaagaacgcagcggccgc
tggacaagctatgtacaaagaaatacaaaacgctcctagcgagtccatgccaggaggcgaaattgctggaatcattatag
ccctaatagtggtgttggttatcatattagtagccgctttcttcatataccggcgaaaaacaagacaaaatcctgatgac
ctaggatttaaggttttcgacaaaatcagtttcaagaaacccaacttccggaaacctcgcgtggaagttccgccatcttt
tggcttcagatacgggaacgctgagaccgtggggccatcatctacacagggatttgataatcccatgtatggaaataacc
ctttagagcaagaaaagccaatggagatagaaatgatgccgacggcgtcaccatttgaagaagaggaacaacctagtttt
gactcgtcacgtggttttgataaccctctttatgacatatcgcctcagatttga

Protein
Protein IDpfu_aug2.0_1229.1_31535.t1
Definition-
>pfu_aug2.0_1229.1_31535.t1
MNGEVVFGANSILAFTDTPDHSASCSPYDGVVEFNVTYPRDWFDPRNWCQTSSETGSCQSVSVLDSERVPCSSDDVVFPR
ENSYFVNLESNANIKLNTIKITGKASTELLCLSIDKKYAFCAYTTSTFQTFLNTDSGKRMFPVPPVGGRSTVTVQRRPCN
DPTGCACENDQTEILNRICKIQTPHCSKAQCLTVLKPIGSCCDLCGAVLVMEYGAGFRMSNLRDGLHRNVLDKSDDYKDV
NYIVSKTHTGEIQIVLSDVNGKNAAAAGQAMYKEIQNAPSESMPGGEIAGIIIALIVVLVIILVAAFFIYRRKTRQNPDD
LGFKVFDKISFKKPNFRKPRVEVPPSFGFRYGNAETVGPSSTQGFDNPMYGNNPLEQEKPMEIEMMPTASPFEEEEQPSF
DSSRGFDNPLYDISPQI

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