Gene
Gene Model ID | pfu_aug2.0_1229.1_31535 |
---|---|
Locus | scaffold1229.1 : 23956 ... 31450 : + |
To GenomeBrowser | scaffold1229.1:23956..31450 |
Genes list of scaffold | scaffold1229.1 |
Synonym | pfu_aug1.0_15022.1_32495 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1229.1_31535.t1 | 1 | 1 | Amnionless | 1 | 371 | 0.0 | 194.5 | 0.0 | 0.0 | 182.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1229.1_31535.t1 | gi|153791327|ref|NP_001086069.2| | amnion associated transmembrane protein precursor [Xenopus laevis] | 1.0e-28 |
pfu_aug2.0_1229.1_31535.t1 | gi|49256464|gb|AAH74152.1| | MGC81896 protein [Xenopus laevis] | 2.0e-28 |
pfu_aug2.0_1229.1_31535.t1 | gi|291234438|ref|XP_002737155.1| | PREDICTED: protein amnionless-like [Saccoglossus kowalevskii] | 2.0e-28 |
Transcript
Transcript ID | pfu_aug2.0_1229.1_31535.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1229.1_31535.t1 atgaatggagaagttgtgttcggagccaattcgatcctcgccttcacggacactcctgaccacagcgcttcgtgctctcc ttatgacggagtggtggaattcaatgttacctacccacgtgactggttcgatccccggaactggtgccagacaagttcag aaaccggaagttgtcagtcagtttccgttctagattctgaaagagtcccttgcagcagcgatgatgtggtgtttccgaga gaaaattcttactttgttaatttggaatctaatgcaaatattaaactcaacactatcaagataacgggaaaggcaagtac tgaattactttgtttatcgattgataaaaaatacgcattctgtgcatacactacaagtacgttccagacctttctgaaca cggattccgggaaacgtatgttccctgttcctccagtcggtggtcgatcgactgttacagtccaaagacgaccgtgtaat gatcctacaggatgtgcttgtgaaaatgaccaaacagagattttgaacaggatctgtaaaattcagacgcctcattgttc caaagctcagtgtttaacagtgttaaagccgataggctcatgctgcgatctttgtggagctgtcttggtgatggaatacg gagcagggtttaggatgtcaaacctcagagacggcttacacagaaacgtgctggataaatcagacgattataaagacgtg aattatatagtgtctaaaacccataccggcgaaattcagatcgtcctgtcagatgtcaatgggaagaacgcagcggccgc tggacaagctatgtacaaagaaatacaaaacgctcctagcgagtccatgccaggaggcgaaattgctggaatcattatag ccctaatagtggtgttggttatcatattagtagccgctttcttcatataccggcgaaaaacaagacaaaatcctgatgac ctaggatttaaggttttcgacaaaatcagtttcaagaaacccaacttccggaaacctcgcgtggaagttccgccatcttt tggcttcagatacgggaacgctgagaccgtggggccatcatctacacagggatttgataatcccatgtatggaaataacc ctttagagcaagaaaagccaatggagatagaaatgatgccgacggcgtcaccatttgaagaagaggaacaacctagtttt gactcgtcacgtggttttgataaccctctttatgacatatcgcctcagatttga |
Protein
Protein ID | pfu_aug2.0_1229.1_31535.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1229.1_31535.t1 MNGEVVFGANSILAFTDTPDHSASCSPYDGVVEFNVTYPRDWFDPRNWCQTSSETGSCQSVSVLDSERVPCSSDDVVFPR ENSYFVNLESNANIKLNTIKITGKASTELLCLSIDKKYAFCAYTTSTFQTFLNTDSGKRMFPVPPVGGRSTVTVQRRPCN DPTGCACENDQTEILNRICKIQTPHCSKAQCLTVLKPIGSCCDLCGAVLVMEYGAGFRMSNLRDGLHRNVLDKSDDYKDV NYIVSKTHTGEIQIVLSDVNGKNAAAAGQAMYKEIQNAPSESMPGGEIAGIIIALIVVLVIILVAAFFIYRRKTRQNPDD LGFKVFDKISFKKPNFRKPRVEVPPSFGFRYGNAETVGPSSTQGFDNPMYGNNPLEQEKPMEIEMMPTASPFEEEEQPSF DSSRGFDNPLYDISPQI |