Gene
| Gene Model ID | pfu_aug2.0_1229.1_31538 |
|---|---|
| Locus | scaffold1229.1 : 55547 ... 66615 : - |
| To GenomeBrowser | scaffold1229.1:55547..66615 |
| Genes list of scaffold | scaffold1229.1 |
| Synonym | pfu_aug1.0_1010.1_29528 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1229.1_31538.t1 | 11 | 1 | LRR_6 | 144 | 157 | 6.6e-11 | 41.1 | 0.052 | 86.0 | 3.6 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 1 | LRR_4 | 144 | 162 | 3.9e-25 | 86.9 | 0.0084 | 14.0 | 5.4 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 2 | LRR_4 | 145 | 186 | 3.9e-25 | 86.9 | 5.9e-07 | 0.00096 | 18.7 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 1 | LRR_1 | 145 | 159 | 2.2e-21 | 72.6 | 0.052 | 85.0 | 3.7 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 1 | LRR_7 | 145 | 157 | 4.2e-11 | 41.1 | 0.064 | 100.0 | 3.7 |
| pfu_aug2.0_1229.1_31538.t1 | 6 | 1 | LRR_8 | 145 | 201 | 5.0e-38 | 128.6 | 6.3e-06 | 0.01 | 15.5 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 2 | LRR_7 | 168 | 182 | 4.2e-11 | 41.1 | 0.0044 | 7.2 | 7.2 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 2 | LRR_6 | 168 | 181 | 6.6e-11 | 41.1 | 0.0048 | 7.8 | 6.9 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 3 | LRR_4 | 169 | 208 | 3.9e-25 | 86.9 | 1.2e-07 | 0.00019 | 20.9 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 2 | LRR_1 | 170 | 188 | 2.2e-21 | 72.6 | 0.00042 | 0.7 | 10.1 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 3 | LRR_7 | 189 | 204 | 4.2e-11 | 41.1 | 1.6 | 2600.0 | -0.5 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 3 | LRR_6 | 189 | 203 | 6.6e-11 | 41.1 | 0.25 | 410.0 | 1.6 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 3 | LRR_1 | 191 | 206 | 2.2e-21 | 72.6 | 0.24 | 400.0 | 1.7 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 4 | LRR_6 | 255 | 266 | 6.6e-11 | 41.1 | 0.55 | 910.0 | 0.5 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 4 | LRR_4 | 256 | 290 | 3.9e-25 | 86.9 | 7.6e-07 | 0.0013 | 18.3 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 4 | LRR_1 | 256 | 270 | 2.2e-21 | 72.6 | 0.18 | 300.0 | 2.1 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 4 | LRR_7 | 256 | 273 | 4.2e-11 | 41.1 | 1.3 | 2200.0 | -0.2 |
| pfu_aug2.0_1229.1_31538.t1 | 6 | 2 | LRR_8 | 256 | 311 | 5.0e-38 | 128.6 | 1.7e-11 | 2.7e-08 | 33.4 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 5 | LRR_6 | 276 | 290 | 6.6e-11 | 41.1 | 0.00042 | 0.7 | 10.1 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 5 | LRR_1 | 278 | 298 | 2.2e-21 | 72.6 | 0.0013 | 2.2 | 8.6 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 5 | LRR_7 | 278 | 291 | 4.2e-11 | 41.1 | 0.0057 | 9.5 | 6.9 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 6 | LRR_6 | 301 | 313 | 6.6e-11 | 41.1 | 0.33 | 540.0 | 1.2 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 5 | LRR_4 | 302 | 342 | 3.9e-25 | 86.9 | 4.3e-08 | 7.0e-05 | 22.3 |
| pfu_aug2.0_1229.1_31538.t1 | 6 | 3 | LRR_8 | 302 | 360 | 5.0e-38 | 128.6 | 2.6e-15 | 4.3e-12 | 45.6 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 6 | LRR_1 | 303 | 324 | 2.2e-21 | 72.6 | 0.0041 | 6.8 | 7.1 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 7 | LRR_6 | 324 | 343 | 6.6e-11 | 41.1 | 0.00011 | 0.18 | 11.9 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 6 | LRR_4 | 327 | 364 | 3.9e-25 | 86.9 | 2.5e-10 | 4.2e-07 | 29.4 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 7 | LRR_1 | 327 | 346 | 2.2e-21 | 72.6 | 1.8e-05 | 0.029 | 14.3 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 6 | LRR_7 | 327 | 340 | 4.2e-11 | 41.1 | 0.0006 | 0.99 | 9.8 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 8 | LRR_6 | 348 | 361 | 6.6e-11 | 41.1 | 0.11 | 180.0 | 2.6 |
| pfu_aug2.0_1229.1_31538.t1 | 6 | 4 | LRR_8 | 349 | 408 | 5.0e-38 | 128.6 | 3.6e-14 | 5.9e-11 | 41.9 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 8 | LRR_1 | 350 | 372 | 2.2e-21 | 72.6 | 0.00094 | 1.5 | 9.1 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 7 | LRR_7 | 350 | 365 | 4.2e-11 | 41.1 | 0.0021 | 3.5 | 8.2 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 7 | LRR_4 | 375 | 412 | 3.9e-25 | 86.9 | 2.7e-05 | 0.045 | 13.3 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 9 | LRR_1 | 375 | 394 | 2.2e-21 | 72.6 | 0.054 | 88.0 | 3.7 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 8 | LRR_7 | 375 | 389 | 4.2e-11 | 41.1 | 0.66 | 1100.0 | 0.7 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 8 | LRR_4 | 397 | 436 | 3.9e-25 | 86.9 | 4.6e-09 | 7.5e-06 | 25.4 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 9 | LRR_7 | 397 | 412 | 4.2e-11 | 41.1 | 0.0097 | 16.0 | 6.2 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 10 | LRR_1 | 398 | 420 | 2.2e-21 | 72.6 | 0.0003 | 0.5 | 10.6 |
| pfu_aug2.0_1229.1_31538.t1 | 6 | 5 | LRR_8 | 398 | 452 | 5.0e-38 | 128.6 | 2.5e-12 | 4.2e-09 | 36.0 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 9 | LRR_6 | 399 | 411 | 6.6e-11 | 41.1 | 0.14 | 230.0 | 2.3 |
| pfu_aug2.0_1229.1_31538.t1 | 10 | 10 | LRR_7 | 421 | 433 | 4.2e-11 | 41.1 | 0.028 | 46.0 | 4.8 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 11 | LRR_1 | 422 | 434 | 2.2e-21 | 72.6 | 0.00089 | 1.5 | 9.1 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 10 | LRR_6 | 422 | 433 | 6.6e-11 | 41.1 | 0.051 | 84.0 | 3.7 |
| pfu_aug2.0_1229.1_31538.t1 | 6 | 6 | LRR_8 | 473 | 483 | 5.0e-38 | 128.6 | 3.4 | 5600.0 | -2.9 |
| pfu_aug2.0_1229.1_31538.t1 | 1 | 1 | 7tm_1 | 503 | 761 | 1.1e-29 | 103.4 | 9.4e-33 | 1.5e-29 | 102.8 |
| pfu_aug2.0_1229.1_31538.t1 | 11 | 11 | LRR_6 | 525 | 532 | 6.6e-11 | 41.1 | 3.1 | 5200.0 | -1.9 |
| pfu_aug2.0_1229.1_31538.t1 | 9 | 9 | LRR_4 | 891 | 898 | 3.9e-25 | 86.9 | 6.4 | 11000.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1229.1_31538.t1 | gi|390348796|ref|XP_798789.2| | PREDICTED: G-protein coupled receptor GRL101 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1229.1_31538.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1229.1_31538.t1 atgaatacgtttatcttactctttatagcaggagatgtgacactctgtggaccagatgaagtgacttgtaacgaaacagt cccttgtattccaaggacatcaacgatagaagagaagaccgcgtgcctcaatggtgaatgtcctacaaaccgtacatgtc tgatatttaatgataacgttgaaatgaaggcgaacgcttcaaattatactgaggtttgtattcatgaaaacgaaatttgt gatggcgtatcacactgttcatcaggtgaagatgaggaaaattgcgcatgcccagacggatgtactcgatgtcaaggctc atcttacaaatgtcgcccagaaagtctacccgaaattcctcagatggcaaagtcaatcgacatttctggttataagatgg atattggtattttgtgtaacatgactcgaaagcatttagaaaaattagatgtctcaaatacaaaagtccaaaatctgaaa tgtttagatgataaatactttcctgctttacaggaattagacgtgtcaagcaataatataacggttctcgacaaactaaa ttttccaacgctaaagacaattcgtgtggacaataatcctatccagaaactgtactttttatctagtattagtatgacta tcaggaatgcaaatattaaaagaatggaatggatcattaatgaaaatgaccccattgcacccttagcttttaagccagtc atcaattacacagagccggatccaatgggcgcaaaaatagaatgcaaactcaaagctattgatcttagctacaacagtat gccgcttctagatacgcttggtcattgtcaatcactgaaagagctgaatcttgctagaaacaagataacagttcttgatt tctggtcttttaatggaatgcagtcaatagaaaaggtagacctgagctacaattggcttgaatctatacaaaaatcaaac ttttttggattgacctttcttcaagagctagatctatcttataatcgactaaccaaactagatcctgaatccttcttcga tctgagcaagttgaagatactccgactaaacaataacaagtttcagactcttccatggcctgttttcagtggtcttgttg ctttggaaaagatgtatcttcaggaaaacaaacttaaaacactgcctttaaaaatctttcaaaggacgacaaaactcttg agactggatcttcgaaacaacaaccttacggagcttgtgcacggtatatttatgtcactcggtaaactggaatatttaga tctcagaggaaacgaaatccaagcttatgaggccatgttcagtggacttggtgtgcttgaaaagctaagggtacatagtt tcaccctatgttgctctagaccagctagtgttggaataaatgattgcgaagctcctgctgatatattttcatcatgcacc aacttgataaatttaggttttctaagtgtatgtatctggtttactgccattatgtcggtttttggtaacatgatggctgt aatttacagaatccgtgaaggaacatggataaaagagatgagggatatttttatctcaagcctttgcttatcggacatgt gtatgggtgtgtacttgtttatcattgcattcacagacgttcaatccagaggggaatatggctattatcaccaacaatgg acgaagagtcgattgtgcgacgctgcaggggtgttggtcactgcatccagtgaggcttctacccttttcatcttggccat taccttagaccgctacacggttttcaagtatccattctcgcagaatgtccataagcgctcgattgccattgcatcgatga ttgtcatctggattttcgccatagtcgtggcgattatcccgttcttcttccccgacttctttggtggcagtttctacacc cgctccagtgtgtgtatttccttacccctgactccgacaacgctccagtacagcggttgggaatattcggtcggtctatt catcgtcttcaacctgttcgtctattttatagttgtggctgggcaaattttcatattcaaggaaatacgcagaagtggag tccagaatgacaagaaaagggaaagagaaattgccgttgctaagaatctgtcggctgttgtgatcagtgacaccttgtgc tggattccagttgcgattgtgggatttttcgctctgaatgggattgacgtcaccaatgacgtatatgcttggatcatcgt gtttgtcttacctgtcaactcggcgataaacccttttctgtacacgttccttgccattcgacgtaagcgtgcaaagaatc aacctaaatctagtgaagagagatccggctcagctaagcttcatattgaagagattcgaccacaagaagtgccctgtagc gggatagagaaaactaataattgggattgtatggttattataaccgaccctgaaatatccgacaatacggagattgatgt tatattttctgacaatgaaggctggtcaaagaagtcagacgatgtggaaattctgtatgagattatacgatgctcagtgc caccatacaaagaggagatagaagagcagaaagagcttaaagtccaagtccttgtgaagagaacaacggagaaaactccg ccgtattcaatcagctggatcccacagtgcaccagcataactgatatttcactccaagaaatcaagaatgagcattcaaa gctttga |
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Protein
| Protein ID | pfu_aug2.0_1229.1_31538.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1229.1_31538.t1 MNTFILLFIAGDVTLCGPDEVTCNETVPCIPRTSTIEEKTACLNGECPTNRTCLIFNDNVEMKANASNYTEVCIHENEIC DGVSHCSSGEDEENCACPDGCTRCQGSSYKCRPESLPEIPQMAKSIDISGYKMDIGILCNMTRKHLEKLDVSNTKVQNLK CLDDKYFPALQELDVSSNNITVLDKLNFPTLKTIRVDNNPIQKLYFLSSISMTIRNANIKRMEWIINENDPIAPLAFKPV INYTEPDPMGAKIECKLKAIDLSYNSMPLLDTLGHCQSLKELNLARNKITVLDFWSFNGMQSIEKVDLSYNWLESIQKSN FFGLTFLQELDLSYNRLTKLDPESFFDLSKLKILRLNNNKFQTLPWPVFSGLVALEKMYLQENKLKTLPLKIFQRTTKLL RLDLRNNNLTELVHGIFMSLGKLEYLDLRGNEIQAYEAMFSGLGVLEKLRVHSFTLCCSRPASVGINDCEAPADIFSSCT NLINLGFLSVCIWFTAIMSVFGNMMAVIYRIREGTWIKEMRDIFISSLCLSDMCMGVYLFIIAFTDVQSRGEYGYYHQQW TKSRLCDAAGVLVTASSEASTLFILAITLDRYTVFKYPFSQNVHKRSIAIASMIVIWIFAIVVAIIPFFFPDFFGGSFYT RSSVCISLPLTPTTLQYSGWEYSVGLFIVFNLFVYFIVVAGQIFIFKEIRRSGVQNDKKREREIAVAKNLSAVVISDTLC WIPVAIVGFFALNGIDVTNDVYAWIIVFVLPVNSAINPFLYTFLAIRRKRAKNQPKSSEERSGSAKLHIEEIRPQEVPCS GIEKTNNWDCMVIITDPEISDNTEIDVIFSDNEGWSKKSDDVEILYEIIRCSVPPYKEEIEEQKELKVQVLVKRTTEKTP PYSISWIPQCTSITDISLQEIKNEHSKL |
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