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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1229.1_31542
Locus scaffold1229.1 : 108935 ... 118295 : -
To GenomeBrowser scaffold1229.1:108935..118295
Genes list of scaffold scaffold1229.1
Synonym pfu_aug1.0_1010.1_29525

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1229.1_31542.t1 1 1 Cellulase 121 256 7.2e-09 35.2 2.8e-12 1.4e-08 34.3

Transcript
Transcript IDpfu_aug2.0_1229.1_31542.t1
Definition-
>pfu_aug2.0_1229.1_31542.t1
atgacagtgagacctttggtgttagtacttttgtatgttggctttgcccatgggttaggacttcccggtgttagtagttt
aacctccgccatcgcaggaggagggggaggtggcggttcaagccttagcggagtgttaggagcaggaggcgggacaggag
gcggggcaggaggaggaggtggaggatcaagcagaatagccgcatgcagcaagaacacacagttcctatgtaattaccct
ccatctggtcaaggggaacaaccagtgttccttataggggccaatattccatggaccgactacaacatggggagtttcgg
agatcggaagttctttcttcttacattacctgacctatataagtttgttctgaaggtcaatttagcaggcggaaatacca
tcagactgtttttacacaatgaggggatcggaaggcctatgggagctccgggaaatactgtaagcctggatatatttcaa
acttacctagatgagctccaagatttcatcagattttgccatattaacaacatatatgtgatcttagtactgtggaatgg
aggtcacgtgaccccagggcttggacaccttaaagatttgatcacatcggaaacagccattcaagcctatattgacaacg
ctctgacgccaatggttcaaaaactgaaagacgagccagcggttctaggttgggacattatcaatcaaccagaaggcatc
atgaagaaaaacgtaactgacaagaatgactgctgggataacacttaccttgagaagaaagcacctggacgtaaagttgg
ctgggctggggaactggtcacacccaaggaattgcaaacatttattaacaaattggctgcagcgatcagaaaagagtaca
aaagtataaacctagagccgcaaataacggtgagcgcttatcacatgatgaccttgaccttccaatggcagtgcaaaaac
ctctacaatgactactgcctgcaagcatcaggaggcgaagaggagaaaccatacgcagcttacgccatgggaggtcataa
cactccgccacgcccactcataatctctgaattcacgactgaacggggccgtccacattcaaaatggagtctggataaac
aagtagactacctctacagaagtggatatgctggtggtttgacatgggatcttaccgaagtagctgatgaacccgacaaa
tggagcacacagcgctctgctatatcctcactacgtgggaaaagaggtatctgtccggaaatttcgggtcagccaacagg
agaaccgggtgataatgtacccccggatcttaaagaataccttaaacctgttatacaggcggctaaaatgatcagtaaag
tggccaatgctttgaagaaggcaacatgtctaagtgcaccctga

Protein
Protein IDpfu_aug2.0_1229.1_31542.t1
Definition-
>pfu_aug2.0_1229.1_31542.t1
MTVRPLVLVLLYVGFAHGLGLPGVSSLTSAIAGGGGGGGSSLSGVLGAGGGTGGGAGGGGGGSSRIAACSKNTQFLCNYP
PSGQGEQPVFLIGANIPWTDYNMGSFGDRKFFLLTLPDLYKFVLKVNLAGGNTIRLFLHNEGIGRPMGAPGNTVSLDIFQ
TYLDELQDFIRFCHINNIYVILVLWNGGHVTPGLGHLKDLITSETAIQAYIDNALTPMVQKLKDEPAVLGWDIINQPEGI
MKKNVTDKNDCWDNTYLEKKAPGRKVGWAGELVTPKELQTFINKLAAAIRKEYKSINLEPQITVSAYHMMTLTFQWQCKN
LYNDYCLQASGGEEEKPYAAYAMGGHNTPPRPLIISEFTTERGRPHSKWSLDKQVDYLYRSGYAGGLTWDLTEVADEPDK
WSTQRSAISSLRGKRGICPEISGQPTGEPGDNVPPDLKEYLKPVIQAAKMISKVANALKKATCLSAP

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