Gene
| Gene Model ID | pfu_aug2.0_1231.1_04903 |
|---|---|
| Locus | scaffold1231.1 : 90204 ... 94165 : - |
| To GenomeBrowser | scaffold1231.1:90204..94165 |
| Genes list of scaffold | scaffold1231.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1231.1_04903.t1 | 1 | 1 | RVT_1 | 7 | 92 | 6.6e-13 | 48.5 | 4.8e-17 | 7.2e-13 | 48.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1231.1_04903.t1 | gi|585650454|ref|XP_006814583.1| | PREDICTED: ATP-binding cassette sub-family A member 1-like, partial [Saccoglossus kowalevskii] | 7.0e-14 |
| pfu_aug2.0_1231.1_04903.t1 | gi|557021600|ref|XP_006011093.1| | PREDICTED: diacylglycerol O-acyltransferase 1-like [Latimeria chalumnae] | 3.0e-11 |
| pfu_aug2.0_1231.1_04903.t1 | gi|685380830|ref|XP_009123074.1| | PREDICTED: LINE-1 reverse transcriptase homolog [Brassica rapa] | 5.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_1231.1_04903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1231.1_04903.t1 atgaaaagtaaacatcaaaaagctgtacattctctggaagtattaataaaaacatatttctctaaagcgtttgactctct tgaatgggaacttatgttctactctctaagaaaatttggatttcaggattctataataaaatggataaagttgatgtata ccaatattaaaagctcagtaagcaataatggatgggtatctgctcctgtcaatgttctgcgtggaatacgtcaagggtgt ccgtttagtgctctgatctttgtcatagctgtagattttggcctgcaaaattag |
|
Protein
| Protein ID | pfu_aug2.0_1231.1_04903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1231.1_04903.t1 MKSKHQKAVHSLEVLIKTYFSKAFDSLEWELMFYSLRKFGFQDSIIKWIKLMYTNIKSSVSNNGWVSAPVNVLRGIRQGC PFSALIFVIAVDFGLQN |
|