Gene
| Gene Model ID | pfu_aug2.0_1232.1_08269 |
|---|---|
| Locus | scaffold1232.1 : 86557 ... 97775 : - |
| To GenomeBrowser | scaffold1232.1:86557..97775 |
| Genes list of scaffold | scaffold1232.1 |
| Synonym | pfu_aug1.0_7089.1_52885 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1232.1_08269.t1 | 1 | 1 | THAP | 331 | 401 | 2.1e-09 | 37.4 | 2.8e-12 | 1.0e-08 | 35.2 |
| pfu_aug2.0_1232.1_08269.t1 | 1 | 1 | HTH_Tnp_4 | 614 | 664 | 4.5e-11 | 42.1 | 2.1e-14 | 7.9e-11 | 41.3 |
| pfu_aug2.0_1232.1_08269.t1 | 1 | 1 | DDE_Tnp_4 | 695 | 778 | 1.2e-23 | 83.4 | 7.1e-27 | 2.6e-23 | 82.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1232.1_08269.t1 | gi|449687165|ref|XP_004211379.1| | PREDICTED: uncharacterized protein LOC101235502 [Hydra vulgaris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1232.1_08269.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1232.1_08269.t1 atgacggacagtgatttggagatagatggttgccttggtaatgaccatagtcagcttcatgaaattgtggaagtcgacgg accatttgatgaacttgatggacaaaagaaatgtacagggaggagcactatggatgcaagacccacaaatattacataca acaaggtttctgatcgtaatggacatgtaccaagcatgtcaaatcacaggaaacatgttgattccatgacaacatattca agaatacaaagcatgatgggaagtgggcaaacaaacgtgcaatcacaaagcatgatgggaagtcagatttcccaaccttc agatgctatggaatgtgacattcaagaggtagcccaacatgtggattttagaaatgctaccattggtcatccacaaactg aaactatggcaacgggaccgaggattgtaaatgaaaggaatgttgtgactggacaaccagatagtatgcatgtgatatca ggaaggaataaggttaaagcagaggtggatccaaacttttatggagcacatggtcctcagattgtgtcgcccttagaaca gtatgataatgttcccatggaagaagatgtcagaacacgacggaggcgggaacatgacatcgggatcatatcagcggcac atgtggagcccaagttgttacggagaaatgaagggccaggaatcagagcagcgcagtctcagagatacaaagacgatgtg ttgtccatcaataatccaaaattcgcggattacctgagcagtatctatccttcagagcttgaagtaaaagaaactacaga gacaaataattcagcatcctatttggacataatgttgtcctacgacactgatggtcacatgaacacctcactctatgaca aacgtgacgacttcaatttcagcattacaaactttccttttctgagtagcaacatcccttcatcgcctgcttatggccaa cgggcactggttatcggtatgcctgtttatcattgttgtgtgccgggttgtacctcctcatcgcgtaaacaaaagaattt tatcaagtatccccaccttcaagacgtcaaatttgtttctttgccaccgaaaatccaagcatccaaacgaaatcagtgga ttcggttgatcagacgtgaaagaacatgggtaccaaacaaatacaccagaatctgttccttacattttgaacgtgattcc caatcgccaacgctttttccttacaacaattttaaggaatcaactaacaagagggaaactggcaactcgcttagatgtac aatagcagataacattgtacagttcgaagatcaggagactcaatctgaagaccaagtggaaagaaatgaagactgcatcc cagatcataaatttgaggaagatgatgtcccttatgtagttggagaagtgcacttggcagagcaagtaaaagatccatgt acagactatggcttaaaaggacacaagcacaaccatgccccagcacactctgaccacatatatctcgtaacaggtgggtc aataggggatgtcaaggatgcaggtgttcaaacagctttaaccatgcaggaaatatctaatcttgaaaaacagaaaaaag ctctagaggataaacaggctaataagtcagcactcttgagggaggcatttgtggagaatgtgatcaagaatgatgaaaat gtaaggcagtatacaggatttgcatcactttcgttgctacttggaattttcaatatactggtctccaagagctcatccct gaaatattggtcaggaccaaacagcgcaaaggaaaagatctatcaaaagaagcaacattacggaaagcctggacctgcta ggaagctttcattatttcacgagtatatcctcactttagttcgacttcgacttggaatgttcgagttttgcataggagat atttttggagtttcgaaatctcgagtttctcaaatttttattacatggattacttttatgtcaaccatattagggaattt aatcaaatggccgtctagaaatcaagtaaaaaagtacatgcctcactctttcagaagacattatcctaaaaccagagcta tcattgattgtactgaatttttctttgagcatcctaggtcacctaactcacaagctgccacatatagtacatacaagtca agaaacacgggaaaatgtttgattgctatttcaccgaggggcaccataacatttgtttcaaaactctatggtggtaatgt atcagaccgatacataactcaggactctggatttgtagattttgttgaagaaggagatgacataatggcagatagggggt ttcaccatacgagatctactaacagacaagcgtgccactttgaatataccgccctttactag |
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Protein
| Protein ID | pfu_aug2.0_1232.1_08269.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1232.1_08269.t1 MTDSDLEIDGCLGNDHSQLHEIVEVDGPFDELDGQKKCTGRSTMDARPTNITYNKVSDRNGHVPSMSNHRKHVDSMTTYS RIQSMMGSGQTNVQSQSMMGSQISQPSDAMECDIQEVAQHVDFRNATIGHPQTETMATGPRIVNERNVVTGQPDSMHVIS GRNKVKAEVDPNFYGAHGPQIVSPLEQYDNVPMEEDVRTRRRREHDIGIISAAHVEPKLLRRNEGPGIRAAQSQRYKDDV LSINNPKFADYLSSIYPSELEVKETTETNNSASYLDIMLSYDTDGHMNTSLYDKRDDFNFSITNFPFLSSNIPSSPAYGQ RALVIGMPVYHCCVPGCTSSSRKQKNFIKYPHLQDVKFVSLPPKIQASKRNQWIRLIRRERTWVPNKYTRICSLHFERDS QSPTLFPYNNFKESTNKRETGNSLRCTIADNIVQFEDQETQSEDQVERNEDCIPDHKFEEDDVPYVVGEVHLAEQVKDPC TDYGLKGHKHNHAPAHSDHIYLVTGGSIGDVKDAGVQTALTMQEISNLEKQKKALEDKQANKSALLREAFVENVIKNDEN VRQYTGFASLSLLLGIFNILVSKSSSLKYWSGPNSAKEKIYQKKQHYGKPGPARKLSLFHEYILTLVRLRLGMFEFCIGD IFGVSKSRVSQIFITWITFMSTILGNLIKWPSRNQVKKYMPHSFRRHYPKTRAIIDCTEFFFEHPRSPNSQAATYSTYKS RNTGKCLIAISPRGTITFVSKLYGGNVSDRYITQDSGFVDFVEEGDDIMADRGFHHTRSTNRQACHFEYTALY |
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