Gene
| Gene Model ID | pfu_aug2.0_1232.1_08272 |
|---|---|
| Locus | scaffold1232.1 : 112204 ... 145345 : - |
| To GenomeBrowser | scaffold1232.1:112204..145345 |
| Genes list of scaffold | scaffold1232.1 |
| Synonym | pfu_aug1.0_35118.1_12199 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| excitatory amino acid transporter 1-like isoform x2 | GO:0015293 GO:0016020 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1232.1_08272.t1 | 2 | 1 | SDF | 63 | 567 | 0.0 | 586.1 | 0.0 | 0.0 | 417.1 |
| pfu_aug2.0_1232.1_08272.t1 | 2 | 2 | SDF | 605 | 734 | 0.0 | 586.1 | 0.0 | 0.0 | 173.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1232.1_08272.t1 | gi|676430999|ref|XP_009046107.1| | hypothetical protein LOTGIDRAFT_61417, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1232.1_08272.t1 | gi|551509805|ref|XP_005806428.1| | PREDICTED: excitatory amino acid transporter 1-like isoform X2 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_1232.1_08272.t1 | gi|551509803|ref|XP_005806427.1| | PREDICTED: excitatory amino acid transporter 1-like isoform X1 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_1232.1_08272.t1 | gi|697473979|ref|XP_009670007.1| | PREDICTED: excitatory amino acid transporter 4-like isoform X1 [Struthio camelus australis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1232.1_08272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1232.1_08272.t1 atggatcaattgtccgaacgcacggtcatgatcccgccgaataatgcagtcacggcaaattccgagcaacaacccaaagt ggatacgaaagtgtcgatgtcatttccggatgacggcggtgggtattcggaaaaattccagaattttgcgacgaaatgtt gccggcgattaaaagacaatttgattcttgttttgttacttggatccgttattctcggttgtatcattggattcgccgca aggtcaagcgggaaatttacgaaaagagaaattatgtatctacagtttccgggtgaacttctaatgcgcatgctcaaaat gttgattctacctctcatcattagcagtctgatcgccggtatcgcgggacttgacgcaaaaacgtgcgggaaaatgggac tacgaacgatcgtttacttcgcgacaacgactatgatttcggtgatactcggaataataatggcggtaagcatacgaccc ggggatggcgccaaaagagacgatctcaaacgatacggggaagctgccaaactgaccactgcagacaccttcttggacct cattaggatctcacgggcggatctggaatcttttccaggggagtgtcgatccccaaattttgaaaagaaaagaaaagaag aagaaaaccccaacaacaacagaaaagcgggaaatcaggatttttgaaatttatttcccgacaatcttatagaagcgtgt tatcatggctacagaacaaaactttccgacgttacagaagaaataaaacaaaaggagacagtgaatatttcaatcaatca aaatggatccttttattacgtcacttccgttggagaaacattttatatcaacgcaacgaatgcaacgtccatgatggttg aaatagatgtaaacaagacttgggtcaatgtgcctggcccaggttccacggggcaggttaatatcctcggtttggttgtt ttctcggtctgtatgggggtcattctcgggcgcatgggggacaaaggaaaaccactcatggacttttgcaactgcgtgtt cgaatgtaccatgaaactctttatcgtgtttatttggtattcccctgtcggaatcactttcctgatcgcaggtaaaatcg ttgccatggaggatttcggtgttctcttgactcaggtcggactatattttctcactgtgttatgcggcttgttcattcat ggatctattatccttccgctcttgtttttcctgtgtacgcggaggaatccgtacaagttcatatatggcattcttcctgc aatagcgacggcgtttggcacgtcatccagctctgctacaatgccagtcacgctccattgcctggaacatgtgaaccata tcgacccacgggtgtgcagctttgtaattcccgtgggggccactatcaacatggacggtaccgccctttacgaagctgtg gctgctctattcatcgcccaagtcaacaacgccaatatgtcgtttgggaatatcataaccataagcatcactgccacggc agcgtcaataggagcagctggcgtccctcaggcggggcttgttaccatggttatcgtattgtcagctgttggactgccca tcgaagacgtcacactcattctcgtagttgattggttcttggatcgcttccgtacattaaccaacgttactggtgacagt ctcggtgcagggatagtccattacctttctctgaacgagttacctcccttaaataaagaacaggaaatggaagaaaagat ggcgaacaacgtcattgaccctagaaaggagaatgacgccatgacggcagtctctgctacaatgccagtcacgctccatt gcctggaacatgtgaaccatatcgatccgcgggtgtgcagctttgttattcccgtgggggccactatcaacatggacggt accgccctttacgaagctgtggctgctctattcatcgcccaagtcaacaacgccaatatgtcgtttgggaatatcataac tataagcatcactgccacggcagcttcaataggagcagctggcgtccctcaggcggggcttgttaccatggttatcgtat tatcagctgttggactgcccatcgaagatgtcacactcattctcgtggttgattggttcttagatcgcttccgtacactt accaacgttactggtgacagtctcggtgcagggatagtccattacctttctctgaaagagttacctcccttaaataaaga acaggaaatggaagaaaagatgacgaacaacgtccttgatcctagaaaggagaatgacgccatgacggcagtgtga |
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Protein
| Protein ID | pfu_aug2.0_1232.1_08272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1232.1_08272.t1 MDQLSERTVMIPPNNAVTANSEQQPKVDTKVSMSFPDDGGGYSEKFQNFATKCCRRLKDNLILVLLLGSVILGCIIGFAA RSSGKFTKREIMYLQFPGELLMRMLKMLILPLIISSLIAGIAGLDAKTCGKMGLRTIVYFATTTMISVILGIIMAVSIRP GDGAKRDDLKRYGEAAKLTTADTFLDLIRISRADLESFPGECRSPNFEKKRKEEENPNNNRKAGNQDFXNLFPDNLIEAC YHGYRTKLSDVTEEIKQKETVNISINQNGSFYYVTSVGETFYINATNATSMMVEIDVNKTWVNVPGPGSTGQVNILGLVV FSVCMGVILGRMGDKGKPLMDFCNCVFECTMKLFIVFIWYSPVGITFLIAGKIVAMEDFGVLLTQVGLYFLTVLCGLFIH GSIILPLLFFLCTRRNPYKFIYGILPAIATAFGTSSSSATMPVTLHCLEHVNHIDPRVCSFVIPVGATINMDGTALYEAV AALFIAQVNNANMSFGNIITISITATAASIGAAGVPQAGLVTMVIVLSAVGLPIEDVTLILVVDWFLDRFRTLTNVTGDS LGAGIVHYLSLNELPPLNKEQEMEEKMANNVIDPRKENDAMTAVSATMPVTLHCLEHVNHIDPRVCSFVIPVGATINMDG TALYEAVAALFIAQVNNANMSFGNIITISITATAASIGAAGVPQAGLVTMVIVLSAVGLPIEDVTLILVVDWFLDRFRTL TNVTGDSLGAGIVHYLSLKELPPLNKEQEMEEKMTNNVLDPRKENDAMTAV |
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