Gene
| Gene Model ID | pfu_aug2.0_1237.1_24794 |
|---|---|
| Locus | scaffold1237.1 : 29603 ... 38605 : - |
| To GenomeBrowser | scaffold1237.1:29603..38605 |
| Genes list of scaffold | scaffold1237.1 |
| Synonym | pfu_aug1.0_13559.1_53967 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1237.1_24794.t1 | 2 | 1 | PHD | 299 | 313 | 1.7e-07 | 30.7 | 0.026 | 190.0 | 1.8 |
| pfu_aug2.0_1237.1_24794.t1 | 2 | 2 | PHD | 308 | 357 | 1.7e-07 | 30.7 | 8.5e-11 | 6.3e-07 | 28.9 |
| pfu_aug2.0_1237.1_24794.t1 | 1 | 1 | RVT_1 | 1152 | 1351 | 2.6e-19 | 69.4 | 8.0e-23 | 5.9e-19 | 68.2 |
Transcript
| Transcript ID | pfu_aug2.0_1237.1_24794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1237.1_24794.t1 atgcttcgacgaattggtgcgaacttgtgtcttatatttcttattatggcccttgtgaagcaaacatcgcgctcatcact acgcatacaggcaaaaaaggcattggagaatgttcatgcttctgatctgacagacgcctctcatgatattcacagcctta acatgaatacgaaaaattactcgttgaacaaggacaaggcactacataagaagctagatacatgcgatagaaatatgatt caatatgagatgaaatctggtaaaaactttgtggccgaatttaatacagcggcatacgaactatttaagagccagctatc tctcaagcttgaagacatacaaaaagatgcatcttcaaatttgtgctttgaaactcattttgactctgataaacatggtg caattgtttcacaggtcatacatataagaaataaacgaaatgatgggtcaatgggcaaacaactgaagtgcactgtgcat ttataccacacaacttcaaaaatcctagcgaatggtaactatgtctctgtgtttcgggatgaccttttcctgccaattgt cggtgaacttaaagtgttacatcagagtattgacataataaatcttggcatgaaggacatgctctctcagtctacatcaa aatccgaaggtgcatgtaaccctactagaagtacagaaagtgcacctccgtccaataactctgtaaatgtttcacattca cataccagtagattgtctaccaatgcaagtcctactttggcactccatagcatatctgatcaaataactgacaactctca gataaatgccgcctgtacatcaaatagtgcaggtaatgtgaacctgaaatctacctccgatatggcaagtttaagtgacg tgacaaaacgcgatgataaagctagcgatgaaaacactttcatttgccctgcttgtaatcttgaagcccttcttaatacc attcaatgcgactcgtgtttacagtggttccattataagtgcttacgtcttacagagaaagacattgacaaattaccaca aagtatgccatttaactgcgatttgtgtattgacaatatacagtgccttaatttgcaaagtagtgttgatgtgaactccc atgacgcgcactacaacagtaccaacacatcgatcattacaggtacaacggtgactccagtcattactacgtcatctgga catgaacaaaattcgttaaaacgtaaatctgcaaaaaatacaaagatctcagatgggtatcaaagagacatttcacgtct taaagcgtatgtagcagacctagagcttaaagttgatgaccttcaaaagaccgtatcactcattcaattagacaaggatg tacgccagggtcagggattagacacgatgggtaataataacatcacagtaccgacacataatgggagccatcgcgccacc atacaaacaggaaacacgcctgtaggggataatggctgtgctaatacccagtgtagatgctcacaatcgaacctagaaca taaagtggatcttcttttagacttccaaaaaatgtttgctagctttactgccacacagcaagctacacgcgcaattaacg tagccgggaatcagcatgctgccattccaccttatatgcctatgtttacacctatgggtggtctactacctcatgtacat ccttttatgggttatccatacacacacccctctgctccttataaccagcagttaggagctcaagggattccaccgataat tagacccccaccgccaacatatccggtgtttcctacagcccctacaaatacaaacatttctttgtctagagctcatggtg acggccatcgaatgaatactcggaacgagcatcattttagagaaatgcagacacctgtccatcatcttacatctggaggt catagtcacggacctagaacaaatgatactcatataccgtatgaaacatcactgcaatctgggagaacagtacaacatgg tgactcctcatcgatcaagcatatagataacgacacaggcactacttcgtctatgcccagaaatagtgtgcaatcacaat ataaggatataacgtctccgcatacagaggaaacagtacgcatagatggcctttctgcgtcaagaggagacgtacagagg acatacacggacaacaagcagttatttcaaacatactcgctgcaaactaatgacaatatgggcttacaatgtacaccgcc tgtaagacctgtgaatactaaccatagcatgccgctagaaatggtttgtgatcaggagaaaaaaggtcatattgaccagc agttgacaagtgacaaaacagctaaacatcgcatatcgtgccaagaacatcatggtctcattaccccagagacaaactac tcatccgaacttatgacacaccgcatggatgggacactagatgcaccatgtgataatattacaccattaacagtgtctaa tcaggaggaaaaaacccatgatagaccgcaaactacaaagcatgagaatgcaacccaatatgacatactacgtcatgaaa gtcattgtctcgacgcatcagagtcaaagatccaaccatcagaggttacggtacacaacatggatatttcattagctacg tcatatgatgatacctcaaatttacaacagtcttttttatgcattccgggcctgtcagggaaacccccggaacatcaatg gacggaaaatccgagaaattggaaattatggaataggggcaacttgcacttgtataaacaagctgtctcagaaagactct gttccaaacacatcagttcggacatagaaaaatcagtcactcacattcaatcaacacttcttcaagctgaatcaatagct atccctaaaaaggtggttcagttgaaggggcctaaatggaaagcttcaccaaaatccaaacaaatcaggaaaaagagcct tgacactatgaaacttaggacggattctgggaaacctggtccagaacatccactcagccttcagcgagaaagccttaagc gtgaactgcggcctacccaccgacaggaaatggctcttgaaaggagatcattttataaccaaattatgcaggaagatagg ggagagaatttctttcgactgttgaagcgtgcaaacggtcatacaaacttatcactttcaattttacacgatgtggaatt tgaccttcaccttattcgtaacatcgtcgataacacatatgaggatgttccagcagtcagtttcacggaagttcaaactg ccgtttctaaacttcacaaaaaaaaagcctcagacgaattcggactttctgccgaacatttggaaaatgcagttgatata ttgctacactccttatctcagctttgcacgatgattttagaatcaaaggaaattccacagcaatttcagtgtggagtcat tcatccaattcataaaagaggcaaggatgccagtctatgtacaaactaccgtggtatcacagtatcatctaccattggaa aagtattcgaacatgtaattctaggaaaaattgaagataaaataccatcagaacagtcctctctgcaattcggttttact aaaggattgtcaccctttatggccgcacttgttttgtctgaaactattgtagaaggaattgaaaacaatgtaccggtata tctggcctatctagatacacaaaaagctttcgatgtggtcgatcacaattctatgaagtgtaaactatttcatcaagatg taaatcatcatatctggaagattgtgaataaactctattcaactctatcgtcaaaggtcatctggaaaggagagctaagt gatagctttgccaattgtcagggagttagacagggtggaattctgtctacgggactgtacaaagtctatatcaatgatct acttctttcactagagaaatcaaagattggagcctccattgggtcaacatacgttggatgtcctacattcgcagacgatc tctccctagctagtaactatgaaatagacactcagcatatgttggatatctcttacaaatatgcaaaccgtgagagaccc attgaagcagaaattcacattaggcaacttttatttttcggaagtatagtcaggagtggcaactctactttgctaaactt aacaaggcgacaacttgcattgaaaacttgtaaatcacggagctggtttgttcatgtcgagggcttggtggaaagatacg gacttccgtcattagatacaatcttagacaacacaccaacaaagacggaatggaaaaagattgtatacaaccatatagag aagtactggcattcagaactggtccgagattgtatggacaaatcaactctatcatcatgtaatttagactcgttgcagtt tggaacgctacacccactttggaaatatcagaactcttgcatcatggatgtgacacggggtacaattaaaaccagattac ttacaggatcaaaaggccatgatttcatgatagaatatagacgtattaagagcagttctcttggaaatctgtag |
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Protein
| Protein ID | pfu_aug2.0_1237.1_24794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1237.1_24794.t1 MLRRIGANLCLIFLIMALVKQTSRSSLRIQAKKALENVHASDLTDASHDIHSLNMNTKNYSLNKDKALHKKLDTCDRNMI QYEMKSGKNFVAEFNTAAYELFKSQLSLKLEDIQKDASSNLCFETHFDSDKHGAIVSQVIHIRNKRNDGSMGKQLKCTVH LYHTTSKILANGNYVSVFRDDLFLPIVGELKVLHQSIDIINLGMKDMLSQSTSKSEGACNPTRSTESAPPSNNSVNVSHS HTSRLSTNASPTLALHSISDQITDNSQINAACTSNSAGNVNLKSTSDMASLSDVTKRDDKASDENTFICPACNLEALLNT IQCDSCLQWFHYKCLRLTEKDIDKLPQSMPFNCDLCIDNIQCLNLQSSVDVNSHDAHYNSTNTSIITGTTVTPVITTSSG HEQNSLKRKSAKNTKISDGYQRDISRLKAYVADLELKVDDLQKTVSLIQLDKDVRQGQGLDTMGNNNITVPTHNGSHRAT IQTGNTPVGDNGCANTQCRCSQSNLEHKVDLLLDFQKMFASFTATQQATRAINVAGNQHAAIPPYMPMFTPMGGLLPHVH PFMGYPYTHPSAPYNQQLGAQGIPPIIRPPPPTYPVFPTAPTNTNISLSRAHGDGHRMNTRNEHHFREMQTPVHHLTSGG HSHGPRTNDTHIPYETSLQSGRTVQHGDSSSIKHIDNDTGTTSSMPRNSVQSQYKDITSPHTEETVRIDGLSASRGDVQR TYTDNKQLFQTYSLQTNDNMGLQCTPPVRPVNTNHSMPLEMVCDQEKKGHIDQQLTSDKTAKHRISCQEHHGLITPETNY SSELMTHRMDGTLDAPCDNITPLTVSNQEEKTHDRPQTTKHENATQYDILRHESHCLDASESKIQPSEVTVHNMDISLAT SYDDTSNLQQSFLCIPGLSGKPPEHQWTENPRNWKLWNRGNLHLYKQAVSERLCSKHISSDIEKSVTHIQSTLLQAESIA IPKKVVQLKGPKWKASPKSKQIRKKSLDTMKLRTDSGKPGPEHPLSLQRESLKRELRPTHRQEMALERRSFYNQIMQEDR GENFFRLLKRANGHTNLSLSILHDVEFDLHLIRNIVDNTYEDVPAVSFTEVQTAVSKLHKKKASDEFGLSAEHLENAVDI LLHSLSQLCTMILESKEIPQQFQCGVIHPIHKRGKDASLCTNYRGITVSSTIGKVFEHVILGKIEDKIPSEQSSLQFGFT KGLSPFMAALVLSETIVEGIENNVPVYLAYLDTQKAFDVVDHNSMKCKLFHQDVNHHIWKIVNKLYSTLSSKVIWKGELS DSFANCQGVRQGGILSTGLYKVYINDLLLSLEKSKIGASIGSTYVGCPTFADDLSLASNYEIDTQHMLDISYKYANRERP IEAEIHIRQLLFFGSIVRSGNSTLLNLTRRQLALKTCKSRSWFVHVEGLVERYGLPSLDTILDNTPTKTEWKKIVYNHIE KYWHSELVRDCMDKSTLSSCNLDSLQFGTLHPLWKYQNSCIMDVTRGTIKTRLLTGSKGHDFMIEYRRIKSSSLGNL |
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