Gene
| Gene Model ID | pfu_aug2.0_1237.1_24797 |
|---|---|
| Locus | scaffold1237.1 : 77626 ... 103179 : + |
| To GenomeBrowser | scaffold1237.1:77626..103179 |
| Genes list of scaffold | scaffold1237.1 |
| Synonym | pfu_aug1.0_414.1_22173 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial import inner membrane translocase subunit partial | GO:0004930 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1237.1_24797.t1 | 2 | 1 | Lectin_C | 114 | 189 | 1.7e-07 | 31.8 | 9.8e-11 | 4.9e-07 | 30.3 |
| pfu_aug2.0_1237.1_24797.t1 | 2 | 2 | Lectin_C | 194 | 217 | 1.7e-07 | 31.8 | 0.31 | 1500.0 | -0.2 |
| pfu_aug2.0_1237.1_24797.t1 | 1 | 1 | Tim17 | 240 | 349 | 2.6e-26 | 92.1 | 8.6e-30 | 4.3e-26 | 91.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1237.1_24797.t1 | gi|524901548|ref|XP_005107180.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim22-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1237.1_24797.t1 | gi|676466824|ref|XP_009057691.1| | hypothetical protein LOTGIDRAFT_97403, partial [Lottia gigantea] | 9.99995e-41 |
| pfu_aug2.0_1237.1_24797.t1 | gi|690455211|ref|XP_009326936.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim22 [Pygoscelis adeliae] | 1.0e-34 |
| pfu_aug2.0_1237.1_24797.t1 | gi|260834087|ref|XP_002612043.1| | hypothetical protein BRAFLDRAFT_127250 [Branchiostoma floridae] | 2.0e-34 |
| pfu_aug2.0_1237.1_24797.t1 | gi|704168484|ref|XP_010130871.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim22, partial [Buceros rhinoceros silvestris] | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_1237.1_24797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1237.1_24797.t1 atgtatttaacttttgggtggatgatgcttgtaaatcttcagagctgcaaagatggatgcatgcagatgcatttgtttca aacaacattcgatgctatttctgctaaactgacggatttgaacaacatgatgaaacgtttacaaactgatctagacggat ctatccataatacgtgtggacaattgacatatccagatactcatagcagactggacacttttttctgcgattttgaagac gacatatgttccttcacaaaacttggaacttacggatggtcacgtggtcaaggtgcagctgaccgtacaacaggatcaac gttagatgttcaaaaaagcgctagctttgggttgtggctgagaggaaatgacgtcgatgctgagcacacatttgtttaca tggaagaccaaccaaaaccggtcaaaagcttcaattacaccaactggcatccgggacagccaaataatattggagggaac caagactgcatggcgctgctgaaatacggaaatgagtatcaatggggagacgaggactgtagctacaggaaatccttctt ctgtgaagctgagtttgctaactcagatattcccaacaatgattgtatggaactagagaaagagcaggatctccaccaag actggcggcatcaccgacagcaaagcaccaaaacaccctatgcgaaaaaaagagctgaaaggcagagcaagagacgattt gcccttgggggagcgttcggactgtttacagcaggagttgatcccatgtccacaatgtcaacggaaacacctaccaccaa aatggttctccaggagatgaaaactcgttttaaatcttacgggaaaaattttgctttggttggatgcatgtttgctggaa cagaatgcttacttgaaacatatcgaggtaaaacagagatggggaatggtacaatcacaggtggacttgttggaggtgtc ctaggacttagagctggtttgagagccggtgtttacggagccattggatttgctgcattctcaactgccattgactacta tttaagacactga |
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Protein
| Protein ID | pfu_aug2.0_1237.1_24797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1237.1_24797.t1 MYLTFGWMMLVNLQSCKDGCMQMHLFQTTFDAISAKLTDLNNMMKRLQTDLDGSIHNTCGQLTYPDTHSRLDTFFCDFED DICSFTKLGTYGWSRGQGAADRTTGSTLDVQKSASFGLWLRGNDVDAEHTFVYMEDQPKPVKSFNYTNWHPGQPNNIGGN QDCMALLKYGNEYQWGDEDCSYRKSFFCEAEFANSDIPNNDCMELEKEQDLHQDWRHHRQQSTKTPYAKKRAERQSKRRF ALGGAFGLFTAGVDPMSTMSTETPTTKMVLQEMKTRFKSYGKNFALVGCMFAGTECLLETYRGKTEMGNGTITGGLVGGV LGLRAGLRAGVYGAIGFAAFSTAIDYYLRH |
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