Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1237.1_24799
Locus scaffold1237.1 : 167417 ... 169805 : -
To GenomeBrowser scaffold1237.1:167417..169805
Genes list of scaffold scaffold1237.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1237.1_24799.t1 1 1 Macin 23 78 3.3e-17 62.3 3.6e-21 5.3e-17 61.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1237.1_24799.t1 gi|675866558|ref|XP_009018839.1| hypothetical protein HELRODRAFT_80959 [Helobdella robusta] 8.0e-08

Transcript
Transcript IDpfu_aug2.0_1237.1_24799.t1
Definition-
>pfu_aug2.0_1237.1_24799.t1
atgggatctacaaagttggcagttattctgtgtatgatggtggtgttcccaatggtacacgcctcatgttatgatgtttg
gtccaggtgctcgggatggagcagtgctgccactggctatctctggctaagctgtgacaagtgctgcaaatgtaagggaa
aatctggagggagctgtgtttcagttaaagcgagaggatgcccattatctaagaatgcataccagtgtcagtgcaatagg
aggagcttaaggggaggaaaaccggggttttgcagtggcaaagcaaatcattttttctcttgtgataacaagaactaa

Protein
Protein IDpfu_aug2.0_1237.1_24799.t1
Definition-
>pfu_aug2.0_1237.1_24799.t1
MGSTKLAVILCMMVVFPMVHASCYDVWSRCSGWSSAATGYLWLSCDKCCKCKGKSGGSCVSVKARGCPLSKNAYQCQCNR
RSLRGGKPGFCSGKANHFFSCDNKN

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