Gene
| Gene Model ID | pfu_aug2.0_124.1_13628 |
|---|---|
| Locus | scaffold124.1 : 1 ... 18502 : + |
| To GenomeBrowser | scaffold124.1:1..18502 |
| Genes list of scaffold | scaffold124.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribonuclease h2 subunit a-like | GO:0003676 GO:0004519 GO:0016070 GO:0090305 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_124.1_13628.t1 | 1 | 1 | RNase_HII | 1 | 198 | 1.19951e-42 | 145.8 | 0.0 | 1.49939e-42 | 145.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_124.1_13628.t1 | gi|676439557|ref|XP_009048891.1| | hypothetical protein LOTGIDRAFT_200807 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_124.1_13628.t1 | gi|675852448|ref|XP_009011784.1| | hypothetical protein HELRODRAFT_73260 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_124.1_13628.t1 | gi|291229986|ref|XP_002734939.1| | PREDICTED: ribonuclease H2 subunit A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_124.1_13628.t1 | gi|260794677|ref|XP_002592334.1| | hypothetical protein BRAFLDRAFT_285333 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_124.1_13628.t1 | gi|524870844|ref|XP_005092202.1| | PREDICTED: ribonuclease H2 subunit A-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_124.1_13628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13628.t1 gtcctatggtttatggaacatgtttcagccctgtatcaatgaaagagaaatttacagaaatgggatttgcagattccaag acattaacagaagaacaaagagaagaaatatttagtaaaatttgtgaagctggggatattatgggatggatgatagagat tctttctccagcttatatatccaacagtatgctgagcagacaaaaatacaacttgaactcaatctcacatgactgtgcaa tcaggctgattaaacgagcaatagagaaaggtgtgaaagtgacagaggtctatgttgatacagtgggggatccagaaaaa taccaagtcaaactaaaaggaattttccctgatatagatattacagtggccaaaaaagctgatgccttattccccattgt cagcgcagctagtatatgtgctaaagtaggtagagatagggctactaaaaactggaaattccaggaggggatagaaatgg aggagggagaatatggtagtggatatcctggtgatcccaaaacaaagaagttcatgtcggaggaaatggacaaggttttt ggatttcctcaatttgtcagatttggatggtctactgcggccctgattctgcagaaaaatgctgttgcagttaaatggga tgacgatgaagaagaggatgacaaaaacacagtgaaattgacatcttttctcgggaagaaagattcaaagttacaaagac acacatatttcagggacagatgcctatcatcttttcaatcattttga |
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Protein
| Protein ID | pfu_aug2.0_124.1_13628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13628.t1 PMVYGTCFSPVSMKEKFTEMGFADSKTLTEEQREEIFSKICEAGDIMGWMIEILSPAYISNSMLSRQKYNLNSISHDCAI RLIKRAIEKGVKVTEVYVDTVGDPEKYQVKLKGIFPDIDITVAKKADALFPIVSAASICAKVGRDRATKNWKFQEGIEME EGEYGSGYPGDPKTKKFMSEEMDKVFGFPQFVRFGWSTAALILQKNAVAVKWDDDEEEDDKNTVKLTSFLGKKDSKLQRH TYFRDRCLSSFQSF |
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