Gene
| Gene Model ID | pfu_aug2.0_124.1_13631 |
|---|---|
| Locus | scaffold124.1 : 50296 ... 68655 : + |
| To GenomeBrowser | scaffold124.1:50296..68655 |
| Genes list of scaffold | scaffold124.1 |
| Synonym | pfu_aug1.0_13692.1_39537 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_124.1_13631.t1 | 2 | 1 | FYVE | 49 | 117 | 2.9e-27 | 94.3 | 3.1e-18 | 1.1e-14 | 54.0 |
| pfu_aug2.0_124.1_13631.t1 | 2 | 2 | FYVE | 201 | 290 | 2.9e-27 | 94.3 | 1.4e-15 | 5.0e-12 | 45.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_124.1_13631.t1 | gi|524899462|ref|XP_005106162.1| | PREDICTED: uncharacterized protein LOC101851142 isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_124.1_13631.t1 | gi|524899460|ref|XP_005106161.1| | PREDICTED: uncharacterized protein LOC101851142 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_124.1_13631.t1 | gi|524899464|ref|XP_005106163.1| | PREDICTED: uncharacterized protein LOC101851142 isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_124.1_13631.t1 | gi|585663800|ref|XP_006811901.1| | PREDICTED: uncharacterized protein LOC102810146 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_124.1_13631.t1 | gi|260809682|ref|XP_002599634.1| | hypothetical protein BRAFLDRAFT_102567 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_124.1_13631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13631.t1 atgcacagtgtcctgatggccagatcatggagtagacaaacatcaagtacagacttgcagacagaatggagagagcaggt ggagatagcagactggaccacaactcaaggctcagaggcagaccaacaagaaatcacaaagaaacattggaaaaacgctg attcagttaaagcctgttccaacaaggaatgtagaaagaaattcaccctgatagagagaaagcatcattgtagaagatgt ggcctggtattttgcaattcttgtttacagtacctacggaaactgaatttacttgcacatattgatccaaatggtaaaca atataaggtttgtgagtcctgtttcagatcagggagagatgaggagggaatgtccaggaatctaacagagctgtttctga ggctgaaactccatagtgaacagttaaaaaattcacagaataacagggaagccagaaaatggaggtcaaggctggacttt gataaggaatgccagcgactgatagagggatttaagtcacggatcggtacatcagaaatgaagagaacattccatgaaat gacaaccatagtctctactcctgactggcagaaatcaagtacatggctgcaagaaaaccttgcagagacttgtcagttct gtgccgtgaagttgggaactttactaaacaagaaaatgaactgtaaagtgtgtggacgtgttgtgtgtaaacaatgctcc actaaggacttactattatatatacccaatgatgtcgctgatagtaatgtacagccaaagcttgccatcatcaagatcat cgggtgtccagagaaggaacctgagatagccatgtatttacgagtgtgctccgtgtgtcaagaccggcttgtaaaaaaac aagttagtgccatcgaggaagaagattacttggaaaggggagataacttagtacagctgataaactgccatcagaaatgt gtggatatcagtcgtaagctggatacacaactagcggagtaccagattgttatagagtccctcgaggataacagcagcag gggagacaagtcagggaaaagtaacatcaaagtactggctaaatcacaggttgatgttgctgattttctgtcacagtttg tatctaaaatacaaatcttaaaacagatcaaacctgaaacaaatacacaagcagtactcttcaaaaattgtctcaagagt aagtgtgagtattaccaggatatgatgtttacatacagaatgttaacacgtagacttggggaatcaacacctcctgaaat actgtctgttatacagcaaacggtagataaaaatcggaacgggaagcagaagtatgactcggcaacttacgatccttgtg aagttgagttacggtctgccacgtttatgtcccgtttagctgcggctgctttacggcagatgtacgttttatcaaggtgt gccacgatgtctcacggcgagctaaggaatgagttagcggtttcgtcacgttcagtcacggccattattagtgcagagtt gtacatcagacagctgatatttgagtccctccatatttgtgataaacacaaactgaaagtagacatcccccagcttctta gttctgttgacgagtatatagaaaatgaggccatgttatgtatcaaggcagatggagaggactgggagagacatgaggac tgtgtaaaagagatggtcagggagcagatgaaaggccacagacttataagattatctcgacgtcagttacagctacatgg ctctacgcatgctgaggatttacttttaaaacggacggtagaatcgttaaaacaaattatcgttcagctagatatcaaat ctataaacagaagcttcaaacaatcaaaaacagctttgaaagatgcagtctcaaatcttgaacaatctcctcagaagtag |
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Protein
| Protein ID | pfu_aug2.0_124.1_13631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13631.t1 MHSVLMARSWSRQTSSTDLQTEWREQVEIADWTTTQGSEADQQEITKKHWKNADSVKACSNKECRKKFTLIERKHHCRRC GLVFCNSCLQYLRKLNLLAHIDPNGKQYKVCESCFRSGRDEEGMSRNLTELFLRLKLHSEQLKNSQNNREARKWRSRLDF DKECQRLIEGFKSRIGTSEMKRTFHEMTTIVSTPDWQKSSTWLQENLAETCQFCAVKLGTLLNKKMNCKVCGRVVCKQCS TKDLLLYIPNDVADSNVQPKLAIIKIIGCPEKEPEIAMYLRVCSVCQDRLVKKQVSAIEEEDYLERGDNLVQLINCHQKC VDISRKLDTQLAEYQIVIESLEDNSSRGDKSGKSNIKVLAKSQVDVADFLSQFVSKIQILKQIKPETNTQAVLFKNCLKS KCEYYQDMMFTYRMLTRRLGESTPPEILSVIQQTVDKNRNGKQKYDSATYDPCEVELRSATFMSRLAAAALRQMYVLSRC ATMSHGELRNELAVSSRSVTAIISAELYIRQLIFESLHICDKHKLKVDIPQLLSSVDEYIENEAMLCIKADGEDWERHED CVKEMVREQMKGHRLIRLSRRQLQLHGSTHAEDLLLKRTVESLKQIIVQLDIKSINRSFKQSKTALKDAVSNLEQSPQK |
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