Gene
| Gene Model ID | pfu_aug2.0_124.1_13633 |
|---|---|
| Locus | scaffold124.1 : 137716 ... 150520 : + |
| To GenomeBrowser | scaffold124.1:137716..150520 |
| Genes list of scaffold | scaffold124.1 |
| Synonym | pfu_aug1.0_55326.1_05570 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_124.1_13633.t1 | 3 | 1 | RRM_6 | 407 | 475 | 1.5e-18 | 66.5 | 2.6e-09 | 5.5e-06 | 26.2 |
| pfu_aug2.0_124.1_13633.t1 | 6 | 1 | NID | 407 | 437 | 6.5e-11 | 42.1 | 0.07 | 150.0 | 2.5 |
| pfu_aug2.0_124.1_13633.t1 | 3 | 1 | RRM_1 | 407 | 463 | 6.7e-11 | 41.6 | 5.5e-07 | 0.0012 | 18.4 |
| pfu_aug2.0_124.1_13633.t1 | 6 | 2 | NID | 448 | 478 | 6.5e-11 | 42.1 | 0.0045 | 9.6 | 6.3 |
| pfu_aug2.0_124.1_13633.t1 | 3 | 2 | RRM_6 | 509 | 578 | 1.5e-18 | 66.5 | 6.1e-07 | 0.0013 | 18.6 |
| pfu_aug2.0_124.1_13633.t1 | 3 | 2 | RRM_1 | 511 | 578 | 6.7e-11 | 41.6 | 2.8e-05 | 0.06 | 12.9 |
| pfu_aug2.0_124.1_13633.t1 | 6 | 3 | NID | 519 | 536 | 6.5e-11 | 42.1 | 0.22 | 460.0 | 0.9 |
| pfu_aug2.0_124.1_13633.t1 | 6 | 4 | NID | 554 | 581 | 6.5e-11 | 42.1 | 0.00083 | 1.7 | 8.7 |
| pfu_aug2.0_124.1_13633.t1 | 3 | 3 | RRM_6 | 599 | 664 | 1.5e-18 | 66.5 | 1.7e-06 | 0.0036 | 17.2 |
| pfu_aug2.0_124.1_13633.t1 | 3 | 3 | RRM_1 | 599 | 662 | 6.7e-11 | 41.6 | 0.0011 | 2.2 | 7.9 |
| pfu_aug2.0_124.1_13633.t1 | 6 | 5 | NID | 637 | 674 | 6.5e-11 | 42.1 | 4.2e-05 | 0.088 | 12.8 |
| pfu_aug2.0_124.1_13633.t1 | 6 | 6 | NID | 1101 | 1148 | 6.5e-11 | 42.1 | 0.0088 | 19.0 | 5.4 |
| pfu_aug2.0_124.1_13633.t1 | 2 | 1 | Macro | 1258 | 1371 | 0.0 | 181.9 | 2.3e-33 | 4.8e-30 | 103.8 |
| pfu_aug2.0_124.1_13633.t1 | 2 | 2 | Macro | 1473 | 1588 | 0.0 | 181.9 | 1.0e-24 | 2.1e-21 | 76.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_124.1_13633.t1 | gi|699675080|ref|XP_009885562.1| | PREDICTED: poly [ADP-ribose] polymerase 14 [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_124.1_13633.t1 | gi|723148651|ref|XP_010291658.1| | PREDICTED: poly [ADP-ribose] polymerase 14-like [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_124.1_13633.t1 | gi|541949650|ref|XP_005431835.1| | PREDICTED: poly [ADP-ribose] polymerase 14-like [Falco cherrug] | 0.0 |
| pfu_aug2.0_124.1_13633.t1 | gi|700376184|ref|XP_009942534.1| | PREDICTED: poly [ADP-ribose] polymerase 14-like [Opisthocomus hoazin] | 0.0 |
| pfu_aug2.0_124.1_13633.t1 | gi|529422007|ref|XP_005230857.1| | PREDICTED: poly [ADP-ribose] polymerase 14-like [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_124.1_13633.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13633.t1 atgcagagatttccaggaccaggaaaccaagctttccaatcaatacacgggaatccatatgcaaatcagacacaacagga acctcaaaatcctggtggtggacagaacccaggacagggtccaggtcaacaaagggctacaggtcccgctgggccatatg gtttcccatatccacaaggatttgggcagtttggaccaggatacccaggtcctaaccaaggacaaccaggatttccaggt caaagactaccaagtccaggccatgaacatccaggtcaagggcaaggttatccaggtcaaggtcaagcatatccaggtca agggtatccaggtcaaggacaaggatatccaggtcaaggacaattcccctacccaggtattcctccacctggttacatga attttcctggacatttcccacagcaaggaacagacccattttctacaccaaagaaagaggagaaaaagaatgataaagct gacagcagtgaaggaagtggtgatgaaacgtggtcacctcctggtgaaaatcaacaaggaaaaacatctgaaaagatgtc aaagacaggtccctctccaccgccttcttatgaacagtcagagtctcagtatggcatgaagcctgggatgaaaattcctg ttccaccacatcatggacatgcaatgccaacacatattccaccaaattttccatatggaatgtcacatcctgttcccaca agtacagctcatggaattccacatggaatgccacacataccatcaggtgtacctcatgaaatgcaacaaatgggaaatct tgcagcagataagccatcaaaatatccacagggaatggagatcaacataccacctggtgggccaaatgtgatgcaacagc aagctggacctcaaattccaacaggtatacctcaaggacagccaaataggacggcaaaaaatgtgtcatcagatacaaaa aaagagttgaagaaaggatcaaaatcaaatgctccttctaaacaacaaaaacaaatgccaaatattatgcagcagcctgg tggatttaaaattccactagaggaggctgagagaaaagactctatttcctttggaagtgattatgaaccacctagtgtat caccaactccaagcaaacggcaaggtaatagagaacatatccaaaacactgaatctgatgacaaggatgaggaggatgaa gatgataggccattatctatcagagtcagcaatctacctaagggcactacagaggaatctctggaaatgttctttgaaag caaaaagcgttctggcggagaggaaatagagacacttgaatatgatgattctgcaatgactgcaatagtaacattcaaag atccagatgttgctgccagagtcatgtctaggaccccattggtattcaataaaaaacaaataaaagtggaaattttccaa cgggaagatgacaatgagaagaccgataaaagtgatgatgatggtgatgatgatgaagaagaagatgaagatgatggatg cacgatagaagttcgtggtgtgaaaccaagcacgactgatgataacattgagatgttttttgagaacaaaagaaaatctg gaggagaaggggaggtaaaaatgaataaagaggaagaggacgatgaaattgtctactatgtgacatttgagagtaaagaa gttgccgagagagttctgtccaagaaatctctcaaattagatggagcggaattggaggttaagctttataaaccaccccc accaccaaaaccagtacctatgtatgagaacagagtgtttataaatggatttggtcctgccaccactaaagacagtttgg agaatttccttgaagccaaggcacatgcagatgtgttagatgtaacctatggggaggaagaggggactgctttagtcact tttgaggctccaccagtttgtgacagagtctgtaagaagagctcccacaaagtagacggtcagaaacttaacgtccagat ctaccatgaatgcttaggaataccggcatcagatcaggagggcatcaggttcaagcttccagaccctgtcttcctgaaac aattagaaccacgaaaaatgcagtttctctataaatccaaacctaataaagaggccatggaattacaagtctccaaaact aacggtaaaatagtatggcctccaaagcatagcgatcctctcaaaatagaatgcacactatccaaagatgtgaaagattg caataaacttgtcaaaacgtggaaaaatgatgtcacagatgcagtcagtaaattcttcagtgtaatagtagtcgacattt taccagtgcttcaggagggctggggtgaagttaagaaagaattacagacaatgaannnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgtttctcacccagagggtgtagctgtggttttagagaaagaat caaaagagatcatcattgttggtcataaaggtccagttttagatgtccaaagtaaagcgagtgccataattaaaaaagtc tctgatgatcttgataaaaagaagcagcaggtcactgaaaaaatgcccttgaagtatcaccagttgatgtacctgtcaat gcagcatttcaaagaagaaatggagaaacagttcccagacatgaaattagagtttaagatgaaagagagagaaatcattc tcagtggtctttctggtaatgttacaagtgccaaattacttcttctagaaagactgaatgcagtgtgttcctcaagtgct ggagtcttttcaaaacaaagagtcagctttctacttggaaataaggaagttaagaaacatatagcacagaaaatgaagga agcaaatattttggcggtatgggaagtacagaacaaagaagaggtgatgacgcatgctgccacggatgaagatgctgtca aggccgcacatatcatgaaaggagagatcgttgagtcacctgtacaagttcccaaaagttcaatgtacctgctagatgat ccaaagtattcacagaaatgtgacgagataaagaaagactatgctcttgtcacttttactgtcatgaaaaaggaatccag tgttgtcattgtcaccgtgaatgaaaacctggcaaacataagagagatgattcaggatttcttcacatttaatacaattt tcaccgaggagatgaatttgactccacatatgttgaagtttttgaacataaggtacaaaagagaaatagagaaaatacca aaggacttggtgcgtcttcaagttggtgtagagctttctagacagaaaatagtcataaaaggcaccagagatggtcttac acaggcaaaacagcaaattgataatatcctgaataacataaagaagagacgacatgatctcaagagaccaggaattgtca aattgatcaggtcagagcaaggaaaagctaaaatttcgaaggtggaaaaatcctctcgatgtatgataatgatggaggga gatgaggagaggtcaggtggtcaagatcaggacatggtcagaagctggtcaggacaacatggaggatctacaaagctgaa taacggagaggtggccaaacatcgtagtcagtcaggtgtgatgatcttggtacataaaggtgatcttaccagcatgtgtg tggacatgctagttaatgctgccaatcctgagctcagacataatggtggtctggccaaagcacttgtcaaaaaaggtggt gattccattcaacaagaatgcactgccattgtcaatcagaatggaaggttgaatgagggagatgttgtcgtgacatcatc aggtcgactaaagtgtaagaaaatagcccatgctgtaggtcctgcttggaaaggtgggaacagtcaagagagagaaagct tagaggactgtataatgaccagcatgaaggaaaccgatgatcgtcatttctcttccatcgctataccagctctatgtaca ggaatatttggattccccgtctcggaggctacgctggtgattttaagggctgtcaagaagtatctgaggaagaaacagtc atcgggcatcaaaagcattatactttgtgatgtaagagacgagacagtagaaggtttctgtcaggccatgaagaaagagt atggaggaaaggtgacttttgtacagcaagttggtgataagggtcagaatggtggaagatctaatcctaaaatagagaga caagcttcatatcaacaactatcagaaattacaatgggaaaagtctgtgtaaaaattgtgaagggacagatagcaaatca aacagtggatgtaatagtgaacacagcatctaaggacctgaatctaagtcagggctttgtatctaactccctactaaaag caggaggagagaccctgcaagaagaatgtaccaaaaattatcccaacggcatcgagttcggagatgtggcagtgacatct ggtggcaaactgaagtgtaaaaatgtgttacatggtgccttaccagcttggagtcaggatcaaagtgtgcaatccctgga ggtactgcagactttcttgaataattgcctcaaagaagcttcctctaagaaagctaaatccatagccatgccagcaatgg gaacaggaaagctgggttaccagaaagatgtggttgccaagagcatgtttgacgcagcagcaggcgtgtctagtcataag tcttcaatcaaagaagtcagatttgtcatctacgagaaagatacagaaactcttcaggtatcttcatctccattatga |
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Protein
| Protein ID | pfu_aug2.0_124.1_13633.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13633.t1 MQRFPGPGNQAFQSIHGNPYANQTQQEPQNPGGGQNPGQGPGQQRATGPAGPYGFPYPQGFGQFGPGYPGPNQGQPGFPG QRLPSPGHEHPGQGQGYPGQGQAYPGQGYPGQGQGYPGQGQFPYPGIPPPGYMNFPGHFPQQGTDPFSTPKKEEKKNDKA DSSEGSGDETWSPPGENQQGKTSEKMSKTGPSPPPSYEQSESQYGMKPGMKIPVPPHHGHAMPTHIPPNFPYGMSHPVPT STAHGIPHGMPHIPSGVPHEMQQMGNLAADKPSKYPQGMEINIPPGGPNVMQQQAGPQIPTGIPQGQPNRTAKNVSSDTK KELKKGSKSNAPSKQQKQMPNIMQQPGGFKIPLEEAERKDSISFGSDYEPPSVSPTPSKRQGNREHIQNTESDDKDEEDE DDRPLSIRVSNLPKGTTEESLEMFFESKKRSGGEEIETLEYDDSAMTAIVTFKDPDVAARVMSRTPLVFNKKQIKVEIFQ REDDNEKTDKSDDDGDDDEEEDEDDGCTIEVRGVKPSTTDDNIEMFFENKRKSGGEGEVKMNKEEEDDEIVYYVTFESKE VAERVLSKKSLKLDGAELEVKLYKPPPPPKPVPMYENRVFINGFGPATTKDSLENFLEAKAHADVLDVTYGEEEGTALVT FEAPPVCDRVCKKSSHKVDGQKLNVQIYHECLGIPASDQEGIRFKLPDPVFLKQLEPRKMQFLYKSKPNKEAMELQVSKT NGKIVWPPKHSDPLKIECTLSKDVKDCNKLVKTWKNDVTDAVSKFFSVIVVDILPVLQEGWGEVKKELQTMXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHPEGVAVVLEKESKEIIIVGHKGPVLDVQSKASAIIKKV SDDLDKKKQQVTEKMPLKYHQLMYLSMQHFKEEMEKQFPDMKLEFKMKEREIILSGLSGNVTSAKLLLLERLNAVCSSSA GVFSKQRVSFLLGNKEVKKHIAQKMKEANILAVWEVQNKEEVMTHAATDEDAVKAAHIMKGEIVESPVQVPKSSMYLLDD PKYSQKCDEIKKDYALVTFTVMKKESSVVIVTVNENLANIREMIQDFFTFNTIFTEEMNLTPHMLKFLNIRYKREIEKIP KDLVRLQVGVELSRQKIVIKGTRDGLTQAKQQIDNILNNIKKRRHDLKRPGIVKLIRSEQGKAKISKVEKSSRCMIMMEG DEERSGGQDQDMVRSWSGQHGGSTKLNNGEVAKHRSQSGVMILVHKGDLTSMCVDMLVNAANPELRHNGGLAKALVKKGG DSIQQECTAIVNQNGRLNEGDVVVTSSGRLKCKKIAHAVGPAWKGGNSQERESLEDCIMTSMKETDDRHFSSIAIPALCT GIFGFPVSEATLVILRAVKKYLRKKQSSGIKSIILCDVRDETVEGFCQAMKKEYGGKVTFVQQVGDKGQNGGRSNPKIER QASYQQLSEITMGKVCVKIVKGQIANQTVDVIVNTASKDLNLSQGFVSNSLLKAGGETLQEECTKNYPNGIEFGDVAVTS GGKLKCKNVLHGALPAWSQDQSVQSLEVLQTFLNNCLKEASSKKAKSIAMPAMGTGKLGYQKDVVAKSMFDAAAGVSSHK SSIKEVRFVIYEKDTETLQVSSSPL |
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