Gene
| Gene Model ID | pfu_aug2.0_124.1_13634 |
|---|---|
| Locus | scaffold124.1 : 161026 ... 178231 : + |
| To GenomeBrowser | scaffold124.1:161026..178231 |
| Genes list of scaffold | scaffold124.1 |
| Synonym | pfu_aug1.0_240.1_58021 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_124.1_13634.t1 | 2 | 1 | SRCR_2 | 41 | 56 | 4.2e-07 | 30.1 | 1.4 | 10000.0 | -3.3 |
| pfu_aug2.0_124.1_13634.t1 | 2 | 1 | SRCR | 43 | 57 | 1.5e-24 | 86.2 | 0.24 | 1800.0 | -0.7 |
| pfu_aug2.0_124.1_13634.t1 | 2 | 2 | SRCR | 62 | 162 | 1.5e-24 | 86.2 | 2.0e-28 | 1.5e-24 | 86.2 |
| pfu_aug2.0_124.1_13634.t1 | 2 | 2 | SRCR_2 | 67 | 107 | 4.2e-07 | 30.1 | 5.6e-11 | 4.2e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_124.1_13634.t1 | gi|542244613|ref|XP_005459201.1| | PREDICTED: alpha-tectorin-like [Oreochromis niloticus] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_124.1_13634.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13634.t1 atgccaaggtcatattgtccttttggaaacatatcggcacatcgcacacatatgttggaagtgggatctctagcattaaa aggtcctctatggacttgtaaaacagcatgtgcagtagcctgttctgggaatggtacatgggttccttcttctgattcac actgggaaggtacagtacagctttcaaaggaatcgtcaggtctcctggagatataccatagtgggacatgggggactgtg tgtaatgatggttttaacgacgtagacgcaacagtggtctgcaaaagtttgggctacaagacgggaacagcttacacgtt cggacaagcgggcaatttctacccctctgctcctagtcagattagatggatcatttggttggatgatataacatgttcag ggactgaatcgtcgttgacggcatgttctcatatcggatggggaaatcatgactgtggccagtctgaaaatgttggtgta aattgttgttga |
|
Protein
| Protein ID | pfu_aug2.0_124.1_13634.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_124.1_13634.t1 MPRSYCPFGNISAHRTHMLEVGSLALKGPLWTCKTACAVACSGNGTWVPSSDSHWEGTVQLSKESSGLLEIYHSGTWGTV CNDGFNDVDATVVCKSLGYKTGTAYTFGQAGNFYPSAPSQIRWIIWLDDITCSGTESSLTACSHIGWGNHDCGQSENVGV NCC |
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