Gene
| Gene Model ID | pfu_aug2.0_1240.1_01492 |
|---|---|
| Locus | scaffold1240.1 : 7823 ... 10205 : - |
| To GenomeBrowser | scaffold1240.1:7823..10205 |
| Genes list of scaffold | scaffold1240.1 |
| Synonym | pfu_aug1.0_10401.1_17619 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1240.1_01492.t1 | 1 | 1 | zf-B_box | 14 | 47 | 3.0e-10 | 39.8 | 1.4e-13 | 7.2e-10 | 38.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1240.1_01492.t1 | gi|156408004|ref|XP_001641647.1| | predicted protein [Nematostella vectensis] | 2.0e-07 |
| pfu_aug2.0_1240.1_01492.t1 | gi|260811450|ref|XP_002600435.1| | hypothetical protein BRAFLDRAFT_99625 [Branchiostoma floridae] | 7.0e-06 |
| pfu_aug2.0_1240.1_01492.t1 | gi|586479438|ref|XP_006870247.1| | PREDICTED: tripartite motif-containing protein 3 isoform X1 [Chrysochloris asiatica] | 8.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1240.1_01492.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1240.1_01492.t1 atggctgccagtttatgcagggctcaatatgtgctcaagctttgtgaaaaacacgacaagaaagagctacaagcattttg taaaacatgtgtagaaaaaatatgttcatcatgtataaaggaggagcataattcgcatgattgggacttgattacagaca tcgttcgggagaaaaaacgcagtttgccagtggaatgtcaagaaattcgtacaaaacaacttccgggtttaagagacgat atttgtcgctttggtagaaaaatagaagaggaaggaacaagattacaggaaaacaagtctgttttgaatgattcaaggca aagttatatcaacagaattaaccaattgttcgatgacagagtggatgaatttgaggaaaagtccgaggctgctatacaaa tatataaaggcaagcgtgacgcattgaaacagaaagtagaattccttgatatgatgtcaacagctctagacaaggatatt gatatattacctgaccatgacattctagacatggagaaggagatgagagatgaattggaaaaggccctttcttatagctc tgaaacgtacattcttactcaagacgaagataaaataagaacaataaataccaagccattacgacctacctacatcagta agacggagaatgacgacttactggtaacactggtcgaccgaggtggctataacctggtatcaaccagccgccgtattgtc cagcgtatgactctcacagggaaggtgctccacacgtacgagttcaaggaggatggtaagacaaggctatttactcttcc tgtaaggaaagccgaaaacaagaactctgatatatgcatcatcaatcgacacgattctgacagtggtgaactcatagtac ttcataaagacggacgtgtgaagtttatatatagtggagaggatcttgacgatgaaagtttccttccgtttgacattgag tgtgattcaaaaagccatattcttttgactgaaaaatacagcagagcaatacacgtactgagtgctgaggggatgtttct acgaactctatttcatcatcacctacaccccgctgttatatctctccatggagataacctgtggtgtggatttttcgagg gcagagtgaaagttttcgaatacaaaaactga |
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Protein
| Protein ID | pfu_aug2.0_1240.1_01492.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1240.1_01492.t1 MAASLCRAQYVLKLCEKHDKKELQAFCKTCVEKICSSCIKEEHNSHDWDLITDIVREKKRSLPVECQEIRTKQLPGLRDD ICRFGRKIEEEGTRLQENKSVLNDSRQSYINRINQLFDDRVDEFEEKSEAAIQIYKGKRDALKQKVEFLDMMSTALDKDI DILPDHDILDMEKEMRDELEKALSYSSETYILTQDEDKIRTINTKPLRPTYISKTENDDLLVTLVDRGGYNLVSTSRRIV QRMTLTGKVLHTYEFKEDGKTRLFTLPVRKAENKNSDICIINRHDSDSGELIVLHKDGRVKFIYSGEDLDDESFLPFDIE CDSKSHILLTEKYSRAIHVLSAEGMFLRTLFHHHLHPAVISLHGDNLWCGFFEGRVKVFEYKN |
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