Gene
| Gene Model ID | pfu_aug2.0_1240.1_01495 |
|---|---|
| Locus | scaffold1240.1 : 64566 ... 74350 : + |
| To GenomeBrowser | scaffold1240.1:64566..74350 |
| Genes list of scaffold | scaffold1240.1 |
| Synonym | pfu_aug1.0_24562.1_04385 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1240.1_01495.t1 | 1 | 1 | MARVEL | 4 | 116 | 6.9e-11 | 42.1 | 7.1e-15 | 1.1e-10 | 41.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1240.1_01495.t1 | gi|524882496|ref|XP_005097891.1| | PREDICTED: synaptoporin-like isoform X4 [Aplysia californica] | 3.0e-16 |
| pfu_aug2.0_1240.1_01495.t1 | gi|524882490|ref|XP_005097888.1| | PREDICTED: synaptoporin-like isoform X1 [Aplysia californica] | 7.0e-16 |
| pfu_aug2.0_1240.1_01495.t1 | gi|524882494|ref|XP_005097890.1| | PREDICTED: synaptoporin-like isoform X3 [Aplysia californica] | 7.0e-16 |
| pfu_aug2.0_1240.1_01495.t1 | gi|432864856|ref|XP_004070451.1| | PREDICTED: synaptophysin-like protein 1 [Oryzias latipes] | 3.0e-14 |
| pfu_aug2.0_1240.1_01495.t1 | gi|348543828|ref|XP_003459384.1| | PREDICTED: synaptophysin-like protein 1-like [Oreochromis niloticus] | 5.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_1240.1_01495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1240.1_01495.t1 atgggagacgtaatccagaaggttctgtccatatttgcgtttgccactacaaccagtgtgaacaccatgttgggctttga agccaagaactgcccaccgaacaccaatcctatcagggaatctgtgcaggtggcttatccttttgatttagagcatgaaa gctacactacaccattatgtagactggacaatagtacgatcgtgaattcagcgctactccaagggtccaagtcctcggca gaattctacgtgtttgttggggtgatggtgttcctgtactgtatagcctctgtcattatatacctgttcttcaacaactt gtatgaggataataaatggcctgtagtgaaagagacgaaatatatttatgcaaaccagctgtgttacacaaagaaggaag taattgttatcttcctggaccccagtttctga |
|
Protein
| Protein ID | pfu_aug2.0_1240.1_01495.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1240.1_01495.t1 MGDVIQKVLSIFAFATTTSVNTMLGFEAKNCPPNTNPIRESVQVAYPFDLEHESYTTPLCRLDNSTIVNSALLQGSKSSA EFYVFVGVMVFLYCIASVIIYLFFNNLYEDNKWPVVKETKYIYANQLCYTKKEVIVIFLDPSF |
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