Gene
| Gene Model ID | pfu_aug2.0_1242.1_08275 |
|---|---|
| Locus | scaffold1242.1 : 7651 ... 23045 : - |
| To GenomeBrowser | scaffold1242.1:7651..23045 |
| Genes list of scaffold | scaffold1242.1 |
| Synonym | pfu_aug1.0_3465.1_01461 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dihydropyrimidinase isoform x1 | GO:0016810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1242.1_08275.t1 | 1 | 1 | Amidohydro_5 | 71 | 139 | 6.5e-13 | 48.2 | 8.6e-16 | 2.1e-12 | 46.6 |
| pfu_aug2.0_1242.1_08275.t1 | 4 | 1 | Amidohydro_4 | 96 | 180 | 7.6e-12 | 45.8 | 1.1e-08 | 2.7e-05 | 24.3 |
| pfu_aug2.0_1242.1_08275.t1 | 3 | 1 | Amidohydro_3 | 100 | 114 | 3.1e-07 | 29.9 | 0.00038 | 0.94 | 8.6 |
| pfu_aug2.0_1242.1_08275.t1 | 2 | 1 | Amidohydro_1 | 101 | 477 | 1.4e-26 | 93.9 | 1.5e-26 | 3.6e-23 | 82.7 |
| pfu_aug2.0_1242.1_08275.t1 | 4 | 2 | Amidohydro_4 | 223 | 288 | 7.6e-12 | 45.8 | 1.8 | 4500.0 | -2.7 |
| pfu_aug2.0_1242.1_08275.t1 | 4 | 3 | Amidohydro_4 | 336 | 474 | 7.6e-12 | 45.8 | 1.6e-06 | 0.004 | 17.2 |
| pfu_aug2.0_1242.1_08275.t1 | 3 | 2 | Amidohydro_3 | 337 | 475 | 3.1e-07 | 29.9 | 2.8e-06 | 0.0068 | 15.6 |
| pfu_aug2.0_1242.1_08275.t1 | 3 | 3 | Amidohydro_3 | 519 | 535 | 3.1e-07 | 29.9 | 0.0044 | 11.0 | 5.1 |
| pfu_aug2.0_1242.1_08275.t1 | 2 | 2 | Amidohydro_1 | 520 | 537 | 1.4e-26 | 93.9 | 0.0011 | 2.6 | 7.5 |
| pfu_aug2.0_1242.1_08275.t1 | 4 | 4 | Amidohydro_4 | 522 | 534 | 7.6e-12 | 45.8 | 1.1 | 2700.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1242.1_08275.t1 | gi|676449456|ref|XP_009052060.1| | hypothetical protein LOTGIDRAFT_187839 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1242.1_08275.t1 | gi|524911586|ref|XP_005110654.1| | PREDICTED: dihydropyrimidinase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1242.1_08275.t1 | gi|585695391|ref|XP_006822013.1| | PREDICTED: dihydropyrimidinase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1242.1_08275.t1 | gi|156399650|ref|XP_001638614.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1242.1_08275.t1 | gi|632969994|ref|XP_007901397.1| | PREDICTED: dihydropyrimidinase [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1242.1_08275.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1242.1_08275.t1 atgtataacttagctcgtctgtgtattggtgggggttgtaaccccactgccattctgaggggggagggagagggggagga gtctcatgacagtaaaccagagcagacccaggattggcactgtctgtgtaatgaacacttaagtgcccaatccagactgt tcatcaaaggaggaaaaatagtcaatgacgatcagagctttgatgcagatatatacatagaagatggcattatcaaacaa gttggtaacaatttggttatacctggtggggccaggacgattgaagccaaaggcaaacttgttttaccaggaggtattga cacccatactcacatgcagcttccgtttatgggtacacatgccatagatgacttctacagcggtactaaagcagccctgg ctggaggaactactatgataattgattttgtcctggatcagaagggtgtatcattattagaggcgtatgacaagtggcga ggatgggctgatgggaaggtttgctgtgattacggccttcatgtcggtgtcacgtggtggggtccacaagtagccaagga tatggaggttctatgtgcggaaaaaggtattaatagttttaagatgttcttagcctacaaagatgtctttatgttagaag ataatgaattatatgaaagcttcaaaaaatgtaaacagcttggtgcattggccatggtacatgcagagaatggtcacctc atagcggagaaatccagggaaatgatacaacttggtataacaggtccagagggacatgagatgtgcaggcctgaagaggt tgaggcggaagccactaaccgtgcaatcactatagccaatgaggctaactgtcctctctacatagtacatgttatgagca aatctgcagctgatgttgttacaaatgctcgcagaaaaggtaatattgtgtttggggaacctatcgctgctagtcttggt acagatggtacacattatcataacacttgttggcgacacgctgccggacatgtgatggggcctcctctacgaccagactc caccactcctggatacttaatggatcttctagctaacaatgacttacaagtaacaggcacagacaactgtacttttaatg ccgatcaaaaagccttaggtaaagacgattttaggagaatccccaatggtgtcaatggagtagaagatagaatgtctgta gtatgggagaaaggtgttcatagtggtaaaatggatccatgtagatttgtagctgtaactagtaccaatgctgctaaaat attcaatatctatcctcaaaagcatagtggtaaaatggatccatgtagatttgtagctgtaactagtaccaatgctgcta aaatattcaatatctatcctcaaaagggtaggatagcggtaggatctgatgcagatattgtaatttgggaccctaaggaa actcgtaccatctcggctaagactcatcatcaagccgtagactttaacatctttgagggtatggtctgtcatggtgtccc tctgtacgtcataaccaatggacatgtagtactagaggaaggtcagggtaggatagcggtaggatctgatgcagatattg taatttgggaccctaaggaaactcgtaccatctcggctaagactcatcatcaagccgtagactttaacatctttgagggt atggtctgtcatggtgtccctctgtacgtcataaccaatggacatgtagtactagaggaaggtcagttgaaggtcactca aggaatgggcagatttattcctacaccatgtaactcacagatggtgtttggcagagtagcagacagggagaggtctcgta tgccggtgaaggtggatagagagccctacacaggaccagtgatcgagggcattgaaatgaacaacctcgatggtcccatc aaatcggaaaaccccatagtgcccgattccgctgaatttcataacagacccccaacaagaggtgggaacagaaacttgca agattcctcatttagtctcagtggtgctcaaattgacgacaaagcgccgagacgggcacagattcgtacatcaaatcctc caggtggaaagtcgtcagggttatggtga |
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Protein
| Protein ID | pfu_aug2.0_1242.1_08275.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1242.1_08275.t1 MYNLARLCIGGGCNPTAILRGEGEGEESHDSKPEQTQDWHCLCNEHLSAQSRLFIKGGKIVNDDQSFDADIYIEDGIIKQ VGNNLVIPGGARTIEAKGKLVLPGGIDTHTHMQLPFMGTHAIDDFYSGTKAALAGGTTMIIDFVLDQKGVSLLEAYDKWR GWADGKVCCDYGLHVGVTWWGPQVAKDMEVLCAEKGINSFKMFLAYKDVFMLEDNELYESFKKCKQLGALAMVHAENGHL IAEKSREMIQLGITGPEGHEMCRPEEVEAEATNRAITIANEANCPLYIVHVMSKSAADVVTNARRKGNIVFGEPIAASLG TDGTHYHNTCWRHAAGHVMGPPLRPDSTTPGYLMDLLANNDLQVTGTDNCTFNADQKALGKDDFRRIPNGVNGVEDRMSV VWEKGVHSGKMDPCRFVAVTSTNAAKIFNIYPQKHSGKMDPCRFVAVTSTNAAKIFNIYPQKGRIAVGSDADIVIWDPKE TRTISAKTHHQAVDFNIFEGMVCHGVPLYVITNGHVVLEEGQGRIAVGSDADIVIWDPKETRTISAKTHHQAVDFNIFEG MVCHGVPLYVITNGHVVLEEGQLKVTQGMGRFIPTPCNSQMVFGRVADRERSRMPVKVDREPYTGPVIEGIEMNNLDGPI KSENPIVPDSAEFHNRPPTRGGNRNLQDSSFSLSGAQIDDKAPRRAQIRTSNPPGGKSSGLW |
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