Gene
| Gene Model ID | pfu_aug2.0_1242.1_08278 |
|---|---|
| Locus | scaffold1242.1 : 81916 ... 95408 : + |
| To GenomeBrowser | scaffold1242.1:81916..95408 |
| Genes list of scaffold | scaffold1242.1 |
| Synonym | pfu_aug1.0_4008.1_23457 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| choline kinase alpha-like | GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1242.1_08278.t1 | 1 | 1 | APH | 57 | 273 | 1.1e-12 | 48.2 | 4.2e-16 | 2.1e-12 | 47.3 |
| pfu_aug2.0_1242.1_08278.t1 | 1 | 1 | Choline_kinase | 84 | 292 | 0.0 | 197.5 | 0.0 | 0.0 | 197.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1242.1_08278.t1 | gi|676455220|ref|XP_009053934.1| | hypothetical protein LOTGIDRAFT_116872 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1242.1_08278.t1 | gi|410907399|ref|XP_003967179.1| | PREDICTED: choline/ethanolamine kinase isoform X1 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_1242.1_08278.t1 | gi|548444520|ref|XP_005746035.1| | PREDICTED: choline kinase alpha-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_1242.1_08278.t1 | gi|585667282|ref|XP_006888160.1| | PREDICTED: choline/ethanolamine kinase [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_1242.1_08278.t1 | gi|153792296|ref|NP_001093482.1| | choline/ethanolamine kinase [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1242.1_08278.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1242.1_08278.t1 atggtcaaatataccagtaccagactgagaagatttctagttcgtgctggtcttgtccccaaaataatgagttcctcgtc tagtccagaaatccgccacatggcgtacacgtggagtcgggattcggttggtggggtgtgggctcaagtcccagaggacc agttagatgttcaacagatcagtggtggactatcgaattacctgtacttatgtacactaccagaagggcttgatgctgag gacaacgtacctagaaaagtgttgatgcgtgtttacggggaaatagcacagagaaaagactatctggtccgcaatagtgt catattcgccatattctcagagaagaaactaggaccaaagctctatggaatgtatccacagggccgtatagaagaataca ttcccgccagagcactacgcaccaacgaattagccaatccaaagtattccagccaaattgccaaaaaacttgcttacttc cacacgttagaaatgccattatgtaaaagtccctcattcctacaagaccagttagaagatttattacatctagcagtata tagatcacctatacatttagttcatatgaanaatatggatctaaggaaagaatggcactgtttattagatcttgtttcta aggttgattcaccagttgtattttctcacaatgatctacaagagggtaacattttactgaatgagagtgagacggacgca gagaagcagctgactctgatagacttggagtattgtagttataattaccgtggttttgactttggtaatcatttctgtga atggacgtacaattatacagaggaaaaattcccaaactttacatgtaaacctgagtgttacccttcaaaagaggaacagt accagtttttccgagactatttgacagagaaacgacaattaagaaatgacaggtcagagattacagaggatgagctagtg actctttataaagaagcgacagtttgtgccgtggcctcacactacctctggggaatatggtccatagtgcagctagagat ctgtaatatagagtttggttatttatacatgtacgttgttttcaaattgcctaatgtgaactacatgtacatttag |
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Protein
| Protein ID | pfu_aug2.0_1242.1_08278.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1242.1_08278.t1 MVKYTSTRLRRFLVRAGLVPKIMSSSSSPEIRHMAYTWSRDSVGGVWAQVPEDQLDVQQISGGLSNYLYLCTLPEGLDAE DNVPRKVLMRVYGEIAQRKDYLVRNSVIFAIFSEKKLGPKLYGMYPQGRIEEYIPARALRTNELANPKYSSQIAKKLAYF HTLEMPLCKSPSFLQDQLEDLLHLAVYRSPIHLVHMXNMDLRKEWHCLLDLVSKVDSPVVFSHNDLQEGNILLNESETDA EKQLTLIDLEYCSYNYRGFDFGNHFCEWTYNYTEEKFPNFTCKPECYPSKEEQYQFFRDYLTEKRQLRNDRSEITEDELV TLYKEATVCAVASHYLWGIWSIVQLEICNIEFGYLYMYVVFKLPNVNYMYI |
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