Gene
| Gene Model ID | pfu_aug2.0_1242.1_08281 |
|---|---|
| Locus | scaffold1242.1 : 143191 ... 177052 : - |
| To GenomeBrowser | scaffold1242.1:143191..177052 |
| Genes list of scaffold | scaffold1242.1 |
| Synonym | pfu_aug1.0_27236.1_04567 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-aminobutyric acid type b receptor subunit 2 isoform x2 | GO:0004930 GO:0005887 GO:0007186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1242.1_08281.t1 | 2 | 1 | ANF_receptor | 21 | 100 | 3.7e-18 | 65.4 | 1.6e-10 | 6.0e-07 | 28.5 |
| pfu_aug2.0_1242.1_08281.t1 | 2 | 2 | ANF_receptor | 106 | 281 | 3.7e-18 | 65.4 | 2.5e-12 | 9.1e-09 | 34.5 |
| pfu_aug2.0_1242.1_08281.t1 | 2 | 1 | 7tm_3 | 350 | 601 | 0.0 | 230.3 | 5.4006e-42 | 2.0e-38 | 132.0 |
| pfu_aug2.0_1242.1_08281.t1 | 2 | 2 | 7tm_3 | 601 | 789 | 0.0 | 230.3 | 9.2e-34 | 3.4e-30 | 105.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1242.1_08281.t1 | gi|676455303|ref|XP_009053961.1| | hypothetical protein LOTGIDRAFT_160603 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1242.1_08281.t1 | gi|260820190|ref|XP_002605418.1| | hypothetical protein BRAFLDRAFT_164267 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1242.1_08281.t1 | gi|676491784|ref|XP_009065710.1| | hypothetical protein LOTGIDRAFT_133032 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1242.1_08281.t1 | gi|640791491|ref|XP_008051643.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2 [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_1242.1_08281.t1 | gi|585646977|ref|XP_006813975.1| | PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1242.1_08281.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1242.1_08281.t1 ggaaagccaggattagccgctaagatgttatacgagcttatatacgagcctcctacaaagattgccctcttgggacctcc attatcggatccttttgtcagcactgccaccataacaccattcttcaatttactgcaggttggatacattgccaaaacat ctacagttaaggagcaatctgattatccctcaagattcatgatcaactatatcgaagacgaccttaatgctttgaggata aagatgatggacacctttggctggaagaaagtagcaacattagcttacaacgacgatatcttcatatcgcaatacgatgc gagaattatctttggtgcaatacggagttcaaaagcaccaaaagtgttttgcgaggtatacaaacaagggttgtatggta ggcgatatgtatggatcttaacgggagcatctatgtatgagaattgggtggcaaacattagggaagaggacctcccgtgc ccaagggaacaactatatgcagcgacagacagaatgttgactctaaatcagaagcaattaagtctttcttctaatgagac attctccggttggataccagccgattatgacacctggatgagaaatatagtcgcccaatatccaggtttgcttctttcga ggagtcatcctttcgcctacgatgcagcatgggcactggcgataggtctgaacaacagcctgcaatatctagggaatcaa gaattaaaggactttgactataatgactccgccatatttaatgacatagagagaggaatgagtgaagtcgtattcgatgg cgtatcgggtccagtttcattcaaggaaggtagaagagaaggaatttcttttatagaattaaatataggtgatgatcgta cagacgtgggtcagtttcttcctggttctgaaatccagtggtttgttagaccggaatctctttttaaagggaatacaatt ccaaaggacagttttagttacataacaagaagtgtagagtactcaaaggcttctctggtagtggttctaattttgtcaac tataggctttgctgtagccatcgcctgtttagcgtttaacgtgtactacaagaacaacaagaacataaagatgtcaagcc ccaggattaataatgtcattatagctggagccatgctgatatacattgcggtaatattagcctccgtagactatgtgggc atcagtcaatcctactcggaggtctactgcatgataagtgtttggattataagtattggatttactatgtcctttggtgc cttgttttccaaaacctggagagttcatgttttgttcaggaaagacgatattagaagaaagtctatcaaggacacccagt tattcggcgtagttgcagggcttgtgctaattgatatattcatccttctgccctggaacattatccacccgcttaaagtc aaacttattgagacaaagtcagaggatacaaccaaagatgttataatgacagagacgaattccatttgtgaccacgagtt gaaaatctattggctggcagcacagtatgtttataagggcctgttacttgcttttggtgcttttattgcctgggagacga gacacatttccattccatccatcaacgattctaagtatatcggcttttgtgtgtacaatgtggtagtcgtgtgtgccttg tatgtgcctgtacacacgttcctgtcacctgaagatgtgacgttgaaatacgtgctcagtagttgcatagtcgtgtttgc aactactttggtcctgtgcattttgttcattccaaagataagtgtttggattataagtattggatttactatgtcctttg gtgccttgttttccaaaacctggagagttcatgttttgttcaggaaagacgatattagaagaaagtctatcaaggacacc cagttattcggcgtagttacagggcttgtgctaattgatatattcatccttctgccctggaacattatccacccgctcaa agtcaaactaattgagacgaagtcagaggatacaaccaaagatgtaataatgacagagacgaattccatttgtgaccacg agttgaaaatctattggctggcagcacagtacgtgtataagggcctgctacttgcttttggtgcttttattgcctgggag acgagacacatctcgattccatccatcaacgattctaagtacatcggcttttgtgtgtacaatgtggtagtcgtgtgtgc cctgtatgtgcctgtacacacgttcctgtcacctgaagatgtgacgttgaaatacgtgctcagtagttgcatagtcgtgt ttgcaactactttggtcctgtgcattttgttcattccaaagattcgagtcagcagtggaaagagtaatcgaagtgaggga aaagtcatgttacttcaagtacaagagaactcccaagccacagacaattttgcagcacgaccatccttacacaaagatct tgaggcagagacagaagacgatcataatggaacagacaaaacatcaaatacatatgtttaa |
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Protein
| Protein ID | pfu_aug2.0_1242.1_08281.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1242.1_08281.t1 GKPGLAAKMLYELIYEPPTKIALLGPPLSDPFVSTATITPFFNLLQVGYIAKTSTVKEQSDYPSRFMINYIEDDLNALRI KMMDTFGWKKVATLAYNDDIFISQYDARIIFGAIRSSKAPKVFCEVYKQGLYGRRYVWILTGASMYENWVANIREEDLPC PREQLYAATDRMLTLNQKQLSLSSNETFSGWIPADYDTWMRNIVAQYPGLLLSRSHPFAYDAAWALAIGLNNSLQYLGNQ ELKDFDYNDSAIFNDIERGMSEVVFDGVSGPVSFKEGRREGISFIELNIGDDRTDVGQFLPGSEIQWFVRPESLFKGNTI PKDSFSYITRSVEYSKASLVVVLILSTIGFAVAIACLAFNVYYKNNKNIKMSSPRINNVIIAGAMLIYIAVILASVDYVG ISQSYSEVYCMISVWIISIGFTMSFGALFSKTWRVHVLFRKDDIRRKSIKDTQLFGVVAGLVLIDIFILLPWNIIHPLKV KLIETKSEDTTKDVIMTETNSICDHELKIYWLAAQYVYKGLLLAFGAFIAWETRHISIPSINDSKYIGFCVYNVVVVCAL YVPVHTFLSPEDVTLKYVLSSCIVVFATTLVLCILFIPKISVWIISIGFTMSFGALFSKTWRVHVLFRKDDIRRKSIKDT QLFGVVTGLVLIDIFILLPWNIIHPLKVKLIETKSEDTTKDVIMTETNSICDHELKIYWLAAQYVYKGLLLAFGAFIAWE TRHISIPSINDSKYIGFCVYNVVVVCALYVPVHTFLSPEDVTLKYVLSSCIVVFATTLVLCILFIPKIRVSSGKSNRSEG KVMLLQVQENSQATDNFAARPSLHKDLEAETEDDHNGTDKTSNTYV |
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