Gene
| Gene Model ID | pfu_aug2.0_125.1_16967 |
|---|---|
| Locus | scaffold125.1 : 130496 ... 143109 : + |
| To GenomeBrowser | scaffold125.1:130496..143109 |
| Genes list of scaffold | scaffold125.1 |
| Synonym | pfu_aug1.0_2609.1_37333 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetraspanin-33-like isoform x1 | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_125.1_16967.t1 | 1 | 1 | Tetraspannin | 15 | 223 | 6.8005e-42 | 143.2 | 4.2039e-45 | 7.79963e-42 | 143.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_125.1_16967.t1 | gi|676456339|ref|XP_009054292.1| | hypothetical protein LOTGIDRAFT_160862 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_125.1_16967.t1 | gi|524896000|ref|XP_005104479.1| | PREDICTED: tetraspanin-33-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_125.1_16967.t1 | gi|347967479|ref|XP_307926.5| | AGAP002257-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_125.1_16967.t1 | gi|170056427|ref|XP_001864025.1| | tetraspanin [Culex quinquefasciatus] | 0.0 |
| pfu_aug2.0_125.1_16967.t1 | gi|157104679|ref|XP_001648520.1| | AAEL004147-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_125.1_16967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16967.t1 atgggttgtttcaacacccgtgatacatttgttagtccggttgtcaaatatgtgctgttcttcttcaactttttttgttg gctgtttggtggtgtcctcatagggataggagtgtgggcttacatagagaagaacaagtattactataaggagatacaga cagtgtatgatgttgtgtttgatctgtctataatatttatggtgctcggcattgttattttcatcattggatatgcagga tgtattggtgctctcagggaaaatatcattcttctcaaagtgtactacatcagtatgattgtcattttccttgcccttgt ggttggtgccattgtagcctttatattccgagacaaagtgaaagaggaactaacctcacttctacaggataaccttatta cacgttaccaagacgatcctgatggacagagcaccattgattggatacaagaaaatatacagtgttgtggagtgaacagc tacaaagattggaacagaaatgaatactttaactgtacaaatgatgggaggggcaaccaaagtccgctagcgtgcagtgt gccacattcctgttgcaaagaccaagactctataactgcgggtgtacctaacattttgtgtggtcaaagtgctctcaaat cagcgacacatgcattccttggaattatttttctcagcttggtacatatacagaaagaagataaatactaa |
|
Protein
| Protein ID | pfu_aug2.0_125.1_16967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16967.t1 MGCFNTRDTFVSPVVKYVLFFFNFFCWLFGGVLIGIGVWAYIEKNKYYYKEIQTVYDVVFDLSIIFMVLGIVIFIIGYAG CIGALRENIILLKVYYISMIVIFLALVVGAIVAFIFRDKVKEELTSLLQDNLITRYQDDPDGQSTIDWIQENIQCCGVNS YKDWNRNEYFNCTNDGRGNQSPLACSVPHSCCKDQDSITAGVPNILCGQSALKSATHAFLGIIFLSLVHIQKEDKY |
|