Gene
| Gene Model ID | pfu_aug2.0_125.1_16968 |
|---|---|
| Locus | scaffold125.1 : 159539 ... 171315 : + |
| To GenomeBrowser | scaffold125.1:159539..171315 |
| Genes list of scaffold | scaffold125.1 |
| Synonym | pfu_aug1.0_12278.1_03218 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_125.1_16968.t1 | 1 | 1 | Tetraspannin | 122 | 370 | 1.4e-35 | 122.5 | 5.1e-39 | 1.9e-35 | 122.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_125.1_16968.t1 | gi|676456346|ref|XP_009054294.1| | hypothetical protein LOTGIDRAFT_160864 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_125.1_16968.t1 | gi|548545972|ref|XP_005754200.1| | PREDICTED: tetraspanin-5-like isoform X1 [Pundamilia nyererei] | 1.4013e-45 |
| pfu_aug2.0_125.1_16968.t1 | gi|548545976|ref|XP_005754202.1| | PREDICTED: tetraspanin-5-like isoform X3 [Pundamilia nyererei] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_125.1_16968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16968.t1 atggaagatccaccaggagacgatgagtctgaaactgacatcagatccttcatgatctcccccagcacctccacgtcatc accggctcagagaacaggtgacggatacaatggttatgacatgactatattcgatggattccgtgggaagtacgataatg tggcaacgtcacttccttcagactctgatgacgatacgcactgtgatgacgtagcaagtcgtactacagatgacgctgat cgatcacgaaccgagtacaagttacggtccagtggagaaacatcggagagtaacatgcgccggatggtccggcgactgag cagtttccacgaaagaataccgattcgaattcaaaattttcttttgaagtacacattgttttcctttaactttttatcgt ggttgacaggaatgacagcggtcggggtgggaacctggcagctaacagatgaaaacaaagtcatttctgatgccgttaat ttcattctggatccattcgttgtgttgtgtataattggtgctataacattcacagttgccttccttggatgtgtaggagc cgcacgagaacatgcattcatgatcaaaatgtttcacattgccttatcggttgtgctagtggttgagctcgtatgtggtg cacttgtaattatattctactccaaccctgactttcgggaatggctcaggctaacaccagacaaactgctgaaagatgcc attcttaaatatatggacgacaagggtgtccaggtgtggatggatatgattcagaaacagtttcagtgctgcggtataag tgcaacggactatggttataaagactggcagctcaatatgtattataactgttccgatatcaatccaagtgtttacgcat gcgcagttccagaatcgtgttgcattgtttacccgggcgaaagaatgaataaaatgtgtggatttgacaaatcagacaaa aagctatcagatgtcagggagtggatatacacccaggggtgtgttaaaggcttcggtgaatggatatcaaatcatgaaat ggtaatcttgctcaccgcatgtgtcgttatgtttatgcagtttctaggagtcgtctttgcaaggatatttgtcaaaagga tacagcggcggatcaaatggaccaagaatagaaacagacggtgtagctga |
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Protein
| Protein ID | pfu_aug2.0_125.1_16968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16968.t1 MEDPPGDDESETDIRSFMISPSTSTSSPAQRTGDGYNGYDMTIFDGFRGKYDNVATSLPSDSDDDTHCDDVASRTTDDAD RSRTEYKLRSSGETSESNMRRMVRRLSSFHERIPIRIQNFLLKYTLFSFNFLSWLTGMTAVGVGTWQLTDENKVISDAVN FILDPFVVLCIIGAITFTVAFLGCVGAAREHAFMIKMFHIALSVVLVVELVCGALVIIFYSNPDFREWLRLTPDKLLKDA ILKYMDDKGVQVWMDMIQKQFQCCGISATDYGYKDWQLNMYYNCSDINPSVYACAVPESCCIVYPGERMNKMCGFDKSDK KLSDVREWIYTQGCVKGFGEWISNHEMVILLTACVVMFMQFLGVVFARIFVKRIQRRIKWTKNRNRRCS |
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