Gene
| Gene Model ID | pfu_aug2.0_125.1_16973 |
|---|---|
| Locus | scaffold125.1 : 267011 ... 286338 : - |
| To GenomeBrowser | scaffold125.1:267011..286338 |
| Genes list of scaffold | scaffold125.1 |
| Synonym | pfu_aug1.0_14844.1_46808 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_125.1_16973.t1 | 2 | 1 | Lig_chan | 63 | 85 | 2.3e-19 | 69.5 | 1.9 | 9100.0 | -3.8 |
| pfu_aug2.0_125.1_16973.t1 | 1 | 1 | SBP_bac_3 | 119 | 462 | 1.1e-16 | 60.7 | 7.0e-20 | 3.5e-16 | 59.1 |
| pfu_aug2.0_125.1_16973.t1 | 1 | 1 | Lig_chan-Glu_bd | 132 | 178 | 5.3e-12 | 45.5 | 2.2e-15 | 1.1e-11 | 44.5 |
| pfu_aug2.0_125.1_16973.t1 | 2 | 2 | Lig_chan | 244 | 503 | 2.3e-19 | 69.5 | 5.1e-23 | 2.5e-19 | 69.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_125.1_16973.t1 | gi|676481999|ref|XP_009062556.1| | hypothetical protein LOTGIDRAFT_166867 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_125.1_16973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16973.t1 atgcctcaatatccatatctccatgctagtatccacctgtcaagatggctagttatccatattaacgatattgaacctgt gattgaaacgcaagctgtcctattcgacaatgtggccatagtgacattgcctttctccagcatgtgtaacatgacaaata caagagtggtcattgagcaatattccacaccatgtacatggtatcaaattcggactttaatgtggattccacattcaaaa agagctctcagcaacgtgggacgaataaggttatcaggggaaatacagcttcatagtcacatctttcctaatactgagtt cgggttcaatggtcgacagtttattgtatcaacattaccgtgggcaccattcgtgacaaaagtcaatggaaatattacag atggaatttgtatcgatattcttcgacaactctcacagtccctcaacttcacatacaaaataatagagcctgctgatgga gaatggggtcagatgttaccaaacaagtcgtttaccggtctcattggacagctagaacggcatgagattgacctcctagc ggcacctctttccataacgttacccagggaggcggtcgtagatttcatctaccctttcttcaatgaagtaacaaagatca tacaaaagaaacctaacgagaacgacacaaaatggaggaagttgattgatcctttccatccttacgttctcctgggtttg gctgtctgcctgccgtttgcgtctttcttaatgtctttgtatgagagtgtgttcccccagtacagagacactccggaacg ccatgaagatgacggtttacatatcttctctaacgcattttggtacatgtatggagcactcctaacccaaggaggggagc atatggctgagtcaataacaggtcgtttgttcctgagtacgtggtggctgttctccattactatcatgggtatctacagt ggtaaccttatagctttcctcactgtatcaaaggaaaatctggacttcaagaacatggatgaactgtttgatctggacga ttatgaatggggatttaccggagggacggtgtggacagacttatttaggtcggccactacctctcaacatatgcagttct gggaaagactgaaggtgttcaacagtacagatcctgatgttctctctattgatactaatgttcacgtcaataaggtactg ggtgggaactacgccttcctagcagacgatacttacctacagcagttactgagtgtccattgtgaactagcactatccga ggatgcagtgtttcagacccagtatgcctttgcacttgcaaacaattccttgtttgtaaaactgtttaataaacacatga taaatatccacgagcttggacttttggaacactgggagtacaaattcagtactggttacaatccgtgcgaatacaacgta ttccaagtgaacaaaccaatagaagtatccgatgtacagagtgcattctacctcatagctataggcatcttccttgctct atgttcctttttagtagaatgtcttattcagaggtgtagattaaggaagcgacggaggaaaatgcgcaggtcgtcccata atacgatcatgaagtccatatccacaaacacagatgctgtactcaacctgacgtgtaagaattgtgtgcaaaggaaaaat gagaaaaacaatcaagcagcgatgaaagtgctcaatgtagacactgatttacaaccatattataaacacactgacatgaa atactcatccgacattttatactga |
|
Protein
| Protein ID | pfu_aug2.0_125.1_16973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16973.t1 MPQYPYLHASIHLSRWLVIHINDIEPVIETQAVLFDNVAIVTLPFSSMCNMTNTRVVIEQYSTPCTWYQIRTLMWIPHSK RALSNVGRIRLSGEIQLHSHIFPNTEFGFNGRQFIVSTLPWAPFVTKVNGNITDGICIDILRQLSQSLNFTYKIIEPADG EWGQMLPNKSFTGLIGQLERHEIDLLAAPLSITLPREAVVDFIYPFFNEVTKIIQKKPNENDTKWRKLIDPFHPYVLLGL AVCLPFASFLMSLYESVFPQYRDTPERHEDDGLHIFSNAFWYMYGALLTQGGEHMAESITGRLFLSTWWLFSITIMGIYS GNLIAFLTVSKENLDFKNMDELFDLDDYEWGFTGGTVWTDLFRSATTSQHMQFWERLKVFNSTDPDVLSIDTNVHVNKVL GGNYAFLADDTYLQQLLSVHCELALSEDAVFQTQYAFALANNSLFVKLFNKHMINIHELGLLEHWEYKFSTGYNPCEYNV FQVNKPIEVSDVQSAFYLIAIGIFLALCSFLVECLIQRCRLRKRRRKMRRSSHNTIMKSISTNTDAVLNLTCKNCVQRKN EKNNQAAMKVLNVDTDLQPYYKHTDMKYSSDILY |
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