Gene
| Gene Model ID | pfu_aug2.0_125.1_16975 |
|---|---|
| Locus | scaffold125.1 : 321897 ... 327378 : - |
| To GenomeBrowser | scaffold125.1:321897..327378 |
| Genes list of scaffold | scaffold125.1 |
| Synonym | pfu_aug1.0_6900.1_67588 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_125.1_16975.t1 | 1 | 1 | Tetraspannin | 16 | 259 | 6.4e-35 | 120.4 | 1.5e-38 | 7.5e-35 | 120.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_125.1_16975.t1 | gi|524871166|ref|XP_005092359.1| | PREDICTED: tetraspanin-33-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_125.1_16975.t1 | gi|675872932|ref|XP_009022026.1| | hypothetical protein HELRODRAFT_83813 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_125.1_16975.t1 | gi|617439273|ref|XP_007564500.1| | PREDICTED: tetraspanin-33 [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_125.1_16975.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16975.t1 atggcgtcgggtgggtcccgccctgaccgcagtgctgtacagccatgtggaaaatacatcttgttcttctgtaattttct atttttattggtagggttaatggccttggctggaggagtatgggtccagacagagaaggagcagaaaacggtcaacagct tcgtggacatcctccttgacccctccatatcaatgatgctgattggaggaagtcttcttgtatttatcagcttctttggt tgctgtggtgctctcagagaaaataccatcttcatacgaatttactactacctggtgatgttttttctactgatacagat aatagccatagtgtttatatttctgttttacttccaaccccaaacactgacagatctgaacatctacccagagactgtac tcaaagacgccattgtcaactatagggacgatccggatcagcaggattttatagataatatgcagaaaacgattggttgc tgtggtatcagtaacgatgacaagggttataaagactgggccgccaatatctactttaactgttcttccggtagtgccga atcatgcgcagtaccatggtcatgttgtatacttaaggagggagaacctatcaacttactgtgtggaggaaacgcccaga gaagagagccctctgaattaacagatcagatttacactaaaggttgtcttaaaggattgggtgactggattggatccaat gttttcctgctggcagggattcttttaggtctactaataccacaatttttnctgcagatctga |
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Protein
| Protein ID | pfu_aug2.0_125.1_16975.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16975.t1 MASGGSRPDRSAVQPCGKYILFFCNFLFLLVGLMALAGGVWVQTEKEQKTVNSFVDILLDPSISMMLIGGSLLVFISFFG CCGALRENTIFIRIYYYLVMFFLLIQIIAIVFIFLFYFQPQTLTDLNIYPETVLKDAIVNYRDDPDQQDFIDNMQKTIGC CGISNDDKGYKDWAANIYFNCSSGSAESCAVPWSCCILKEGEPINLLCGGNAQRREPSELTDQIYTKGCLKGLGDWIGSN VFLLAGILLGLLIPQFXLQI |
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