Gene
| Gene Model ID | pfu_aug2.0_125.1_16982 |
|---|---|
| Locus | scaffold125.1 : 482574 ... 488550 : - |
| To GenomeBrowser | scaffold125.1:482574..488550 |
| Genes list of scaffold | scaffold125.1 |
| Synonym | pfu_aug1.0_23828.1_26123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_125.1_16982.t1 | 2 | 1 | Glyoxalase_4 | 5 | 125 | 5.9e-06 | 26.2 | 0.009 | 45.0 | 4.1 |
| pfu_aug2.0_125.1_16982.t1 | 3 | 1 | Glyoxalase | 64 | 126 | 4.7e-06 | 26.6 | 0.28 | 1400.0 | -0.8 |
| pfu_aug2.0_125.1_16982.t1 | 3 | 2 | Glyoxalase | 186 | 323 | 4.7e-06 | 26.6 | 6.9e-09 | 3.4e-05 | 23.8 |
| pfu_aug2.0_125.1_16982.t1 | 2 | 2 | Glyoxalase_4 | 251 | 318 | 5.9e-06 | 26.2 | 2.0e-07 | 0.00099 | 19.0 |
| pfu_aug2.0_125.1_16982.t1 | 3 | 3 | Glyoxalase | 329 | 355 | 4.7e-06 | 26.6 | 0.6 | 3000.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_125.1_16982.t1 | gi|291231184|ref|XP_002735549.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_125.1_16982.t1 | gi|657570287|ref|XP_008288668.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like protein [Stegastes partitus] | 0.0 |
| pfu_aug2.0_125.1_16982.t1 | gi|260831031|ref|XP_002610463.1| | hypothetical protein BRAFLDRAFT_59543 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_125.1_16982.t1 | gi|736169814|ref|XP_010765504.1| | PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like protein isoform X2 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_125.1_16982.t1 | gi|390356266|ref|XP_781821.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_125.1_16982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16982.t1 atggagcggcttcaccatgtggaattcgccgtaaataatggtgaattgtacttaaataggtttaaattacaatatggatt cgaccttatagcaagtagatcttgtagacataagaaacaatgggtagtccagtcaggaaaagcgatattcttgcttacag aattttatcccgttgaccttcagagtcatgttcaggaagcttacgcaacccattatcaggatgtcttgagcagtgatcct tacttttcacccaatacagaaaatgacatttattccaacaaactagagacagcattcaatgttgcactcaaggttcagaa tgtgagacaaactctggaaactgcagtcaaaggtggtgcagtggtcctgagggagccgtctgtgatcaaagatgaaagag gtgccatagaattagctgtgataaaatcttgcattggaaatgttgtccatactctcatagacgacaaacaatataatggg gtattcttgcctctatttaatgaacattgcagctgcaaaaacattgaatctcagaactttatagtgtcacatatggacca catagcatttgtttgtagtagaggttcaacatcctccattctgaagtggtatgaaaactgttttaagatgcacagatttt tcattaacagtgatgaaaatgcagaagagggattcatgatcaaggatacaggcataggtcttcgaatgaaggccatggaa tattggcattgctcagaaacaggactcaaatcaagtaatgctgaaaaggaatcagatggtgtaaaatttgtcctagtaga atctctagaaggtcaaggtctgaatcaagtggatgtgtttttaggagaccacaatggaccaggtgttcagcatataggac tttataccaacaatattatagaagctgtttctttgttaaagaaaagaggaacagattttgtcaatacaccagatgcatat tacacaggggttggaaagctggacgaaattgaagaagttggaatagatgtagacattctgaaagagaatggtattttatt ggacacagaggcagatccaggtgtgacatcagacagtgatagagaatcagacacttctgataacccaagatatttgatgc aaaagtttaccaagccattgttcagtaaaaggacatttttcttagaattgatagaaagggtaggagcaagaggctttgga gctgggaatataacagctctctggcgagctgtgcaggcctatatgacacaaggagataaatga |
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Protein
| Protein ID | pfu_aug2.0_125.1_16982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_125.1_16982.t1 MERLHHVEFAVNNGELYLNRFKLQYGFDLIASRSCRHKKQWVVQSGKAIFLLTEFYPVDLQSHVQEAYATHYQDVLSSDP YFSPNTENDIYSNKLETAFNVALKVQNVRQTLETAVKGGAVVLREPSVIKDERGAIELAVIKSCIGNVVHTLIDDKQYNG VFLPLFNEHCSCKNIESQNFIVSHMDHIAFVCSRGSTSSILKWYENCFKMHRFFINSDENAEEGFMIKDTGIGLRMKAME YWHCSETGLKSSNAEKESDGVKFVLVESLEGQGLNQVDVFLGDHNGPGVQHIGLYTNNIIEAVSLLKKRGTDFVNTPDAY YTGVGKLDEIEEVGIDVDILKENGILLDTEADPGVTSDSDRESDTSDNPRYLMQKFTKPLFSKRTFFLELIERVGARGFG AGNITALWRAVQAYMTQGDK |
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