Gene
| Gene Model ID | pfu_aug2.0_1252.1_08283 |
|---|---|
| Locus | scaffold1252.1 : 21289 ... 38905 : - |
| To GenomeBrowser | scaffold1252.1:21289..38905 |
| Genes list of scaffold | scaffold1252.1 |
| Synonym | pfu_aug1.0_28204.1_11891 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1252.1_08283.t1 | 1 | 1 | SKI | 22 | 158 | 1.5e-18 | 67.1 | 7.3e-22 | 3.6e-18 | 65.9 |
| pfu_aug2.0_1252.1_08283.t1 | 2 | 1 | Thr_synth_N | 167 | 252 | 4.3e-14 | 52.3 | 5.0e-17 | 2.5e-13 | 49.8 |
| pfu_aug2.0_1252.1_08283.t1 | 2 | 1 | PALP | 276 | 390 | 1.2e-07 | 31.2 | 6.7e-11 | 3.3e-07 | 29.8 |
| pfu_aug2.0_1252.1_08283.t1 | 2 | 2 | PALP | 450 | 468 | 1.2e-07 | 31.2 | 0.81 | 4000.0 | -3.3 |
| pfu_aug2.0_1252.1_08283.t1 | 2 | 2 | Thr_synth_N | 569 | 593 | 4.3e-14 | 52.3 | 0.62 | 3100.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1252.1_08283.t1 | gi|585645782|ref|XP_006811616.1| | PREDICTED: threonine synthase-like 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1252.1_08283.t1 | gi|390337569|ref|XP_791506.3| | 0.0 | |
| pfu_aug2.0_1252.1_08283.t1 | gi|676467385|ref|XP_009057871.1| | hypothetical protein LOTGIDRAFT_105242 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1252.1_08283.t1 | gi|530626665|ref|XP_005302862.1| | PREDICTED: threonine synthase-like 1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1252.1_08283.t1 | gi|591367383|ref|XP_007058541.1| | PREDICTED: threonine synthase-like 1 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1252.1_08283.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1252.1_08283.t1 atgcgtcagccaatcgatccattgttggccattttgtctgacgaaaaacacaatcttggtaggttctccgctgncgacca tctactggaaccacactggggaatgacggtggcagataagttagccgaagtaggatctagtggttttgtggaggcggaag gcaaagcgcttctacaatgtgacgtcagtggcaaagtggtgtctctaaccggatcaaacccaatgtacaaagaagctatg gacaaagtgtccaacacaggaacagtcgtgtttttggatgttccaaataatgaaatacttgatcgtttggagaaaatgaa agtaaatagaatagttggacaaggtgatggaatgaccatgtccgatattttgaaataccgtcagcaattttatgaaaaca gttacgatctccgaatcttgtgtgaagcaggagagactcaggaatctattgccagtaaagtagtatccgccgttaagtct atggataatgacagaggctatgtgagttctagaggcggagaaacaattggtggcagcggtgggagagtttcacttagtga cgctattcttactggacttgcaccggatggtggcctgtacgtgccatcgtcagagcttccaaaattctctataggtgaaa tggatagacttgtaaatctagactacagaagcagagccctaagaatgttagagcgagtgataaatccgtatgatgtccat ccgtcagtcttggcaaactttatctctaaggcatacaatgaagacaatttcttatgtaataagattttcccaattcatca tttgcaagcaaaccagtaccttatagaacttttccatggacctactgcatcttttaaagacgcagctttacagttgatgc ctcaactatttgttgaagctttgaagcagaaaggattatatagaaagaaaagatttctgatcgttgtagcaacatccggg gatacaggaggtgctgttttagatggatttagtaaacatgcaggtgagagtggtgttggtgtcatcgtgttgtacccaga acagggagttagctctgtacagaaacggcagatgttgtcactcgctggaaataacgtacaagtatttggtgttgagggag attttgacaagtgtcagtcttttgtgaagaaagccttgaaggacactagtctggcagaacaactccgtgaaaggaacaac tgtcaactgagtgctaccatactgtccattttagtgctgccaattccatcagctggggtcggcttctaccacaagttgtc taccattcctctgcttacctggaccttgtacagcgagagaatggggatacctttcagacggctgatctgtgcatctaaca gtaacaatgcggtgacacaattcataaacacgggtacctacgacatacgttctgtacagcttcagcgcacggcatcgcca gctatagacatcctggtgtcatctaatctagaacggtacctctatcacatctcgggatccactgatgacgtcagacgatg gttccagcagttagagcaggacaaacatttcacaatcgatgaaaatattctaggggaaatccaggggacatttgtagcta aatggtgctcagaggataaatggtacttgttggaccctcacacagcagtagcaaaggttgtagccgattcattcaacaaa aaagatattcctatgttgatagcgtctacggcacattactcaaaatttgctccggaggtcctacactttttcggatacga caagaaaaaggaatcccttgaggaccagtaccgcaaactagggaagatgtgtaaaatgcctgtgatgcatgccaatatgg aagcttgtgcaaaacttccacacgtggaagaaaaagtcctcaaaccagactatgaagattttctacgagagataaattac tttgcagaaaaacttccctga |
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Protein
| Protein ID | pfu_aug2.0_1252.1_08283.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1252.1_08283.t1 MRQPIDPLLAILSDEKHNLGRFSAXDHLLEPHWGMTVADKLAEVGSSGFVEAEGKALLQCDVSGKVVSLTGSNPMYKEAM DKVSNTGTVVFLDVPNNEILDRLEKMKVNRIVGQGDGMTMSDILKYRQQFYENSYDLRILCEAGETQESIASKVVSAVKS MDNDRGYVSSRGGETIGGSGGRVSLSDAILTGLAPDGGLYVPSSELPKFSIGEMDRLVNLDYRSRALRMLERVINPYDVH PSVLANFISKAYNEDNFLCNKIFPIHHLQANQYLIELFHGPTASFKDAALQLMPQLFVEALKQKGLYRKKRFLIVVATSG DTGGAVLDGFSKHAGESGVGVIVLYPEQGVSSVQKRQMLSLAGNNVQVFGVEGDFDKCQSFVKKALKDTSLAEQLRERNN CQLSATILSILVLPIPSAGVGFYHKLSTIPLLTWTLYSERMGIPFRRLICASNSNNAVTQFINTGTYDIRSVQLQRTASP AIDILVSSNLERYLYHISGSTDDVRRWFQQLEQDKHFTIDENILGEIQGTFVAKWCSEDKWYLLDPHTAVAKVVADSFNK KDIPMLIASTAHYSKFAPEVLHFFGYDKKKESLEDQYRKLGKMCKMPVMHANMEACAKLPHVEEKVLKPDYEDFLREINY FAEKLP |
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