Gene
| Gene Model ID | pfu_aug2.0_1255.1_18212 |
|---|---|
| Locus | scaffold1255.1 : 47655 ... 73585 : - |
| To GenomeBrowser | scaffold1255.1:47655..73585 |
| Genes list of scaffold | scaffold1255.1 |
| Synonym | pfu_aug1.0_5076.1_09037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1255.1_18212.t1 | 3 | 1 | DUF4559 | 5 | 118 | 1.6e-26 | 93.1 | 8.3e-14 | 1.4e-10 | 40.8 |
| pfu_aug2.0_1255.1_18212.t1 | 4 | 1 | Ank_2 | 379 | 458 | 1.9e-14 | 53.7 | 0.00076 | 1.2 | 9.4 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 1 | Ank | 379 | 399 | 7.9e-12 | 44.3 | 0.00015 | 0.25 | 11.2 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 2 | Ank | 444 | 457 | 7.9e-12 | 44.3 | 1.7 | 2800.0 | -1.6 |
| pfu_aug2.0_1255.1_18212.t1 | 5 | 1 | Ank_5 | 444 | 457 | 1.2e-06 | 28.5 | 1.5 | 2400.0 | -1.1 |
| pfu_aug2.0_1255.1_18212.t1 | 3 | 2 | DUF4559 | 518 | 650 | 1.6e-26 | 93.1 | 6.3e-19 | 1.0e-15 | 57.6 |
| pfu_aug2.0_1255.1_18212.t1 | 4 | 2 | Ank_2 | 1037 | 1115 | 1.9e-14 | 53.7 | 0.016 | 26.0 | 5.2 |
| pfu_aug2.0_1255.1_18212.t1 | 4 | 3 | Ank_2 | 1077 | 1202 | 1.9e-14 | 53.7 | 1.0e-10 | 1.7e-07 | 31.4 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 3 | Ank | 1079 | 1093 | 7.9e-12 | 44.3 | 0.13 | 220.0 | 1.9 |
| pfu_aug2.0_1255.1_18212.t1 | 5 | 2 | Ank_5 | 1143 | 1161 | 1.2e-06 | 28.5 | 0.083 | 140.0 | 2.9 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 4 | Ank | 1145 | 1164 | 7.9e-12 | 44.3 | 0.014 | 23.0 | 5.0 |
| pfu_aug2.0_1255.1_18212.t1 | 5 | 3 | Ank_5 | 1172 | 1201 | 1.2e-06 | 28.5 | 0.0012 | 2.0 | 8.7 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 5 | Ank | 1175 | 1202 | 7.9e-12 | 44.3 | 2.5e-06 | 0.0041 | 16.8 |
| pfu_aug2.0_1255.1_18212.t1 | 5 | 4 | Ank_5 | 1232 | 1255 | 1.2e-06 | 28.5 | 8.9 | 15000.0 | -3.6 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 6 | Ank | 1236 | 1247 | 7.9e-12 | 44.3 | 0.78 | 1300.0 | -0.5 |
| pfu_aug2.0_1255.1_18212.t1 | 4 | 4 | Ank_2 | 1256 | 1291 | 1.9e-14 | 53.7 | 0.01 | 16.0 | 5.8 |
| pfu_aug2.0_1255.1_18212.t1 | 5 | 5 | Ank_5 | 1267 | 1295 | 1.2e-06 | 28.5 | 0.00017 | 0.29 | 11.4 |
| pfu_aug2.0_1255.1_18212.t1 | 7 | 7 | Ank | 1278 | 1289 | 7.9e-12 | 44.3 | 0.24 | 400.0 | 1.1 |
| pfu_aug2.0_1255.1_18212.t1 | 3 | 3 | DUF4559 | 1349 | 1397 | 1.6e-26 | 93.1 | 4.1 | 6800.0 | -4.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1255.1_18212.t1 | gi|657795651|ref|XP_008324816.1| | PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 50 [Cynoglossus semilaevis] | 1.0e-14 |
| pfu_aug2.0_1255.1_18212.t1 | gi|597797621|ref|XP_007260371.1| | PREDICTED: ankyrin repeat domain-containing protein 50 [Astyanax mexicanus] | 3.0e-12 |
| pfu_aug2.0_1255.1_18212.t1 | gi|498996549|ref|XP_004553762.1| | PREDICTED: ankyrin repeat domain-containing protein 50 [Maylandia zebra] | 8.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1255.1_18212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1255.1_18212.t1 atgatgggagcattcaattggaaaaatatcgattcaacaaaatggccgtcagatgtagaggaagttcagaaggcattcct cccatccaggcacaaagggaagctggacacaacagacctgtcctcttgtttgagcatcatggctaactgcacactgttta acaaccgtaagaaacttctggccataagagatataagaaacaatatttcccacggtaggatgtcaatcagtgtaacagag aaacaagaatacataggaaagattctatcgttcctcaagaaagacaacttaaaaacgttcccatcggtaaggaaggcaat caagcatgtgactcttttagaaactctgagcatcaaagatatacacgaaaatgatctcattgaagaaatagaaaggaata gaatagaagaaagactcaatgcaagaaggggaatctattactatgttaacacgtgtgctacaagttcaatactgatgtca ctgattgtattgtttgcatgcttcatatctcaatggagtagaaacaacgtgtccgaagagagtccatggattcccgggag accgtcttcattcatttcatcccatgatgattttgtaggacgggaatggttaaaggaaaagatacaagagaatttgattc aaagtagaaatggtgtcattttagtggcagaaccaggatttggaaagtcagcttttgttgcaaattttatcaaaacatac gataacgaaaatttgccattacttggatatcatatttgcagacacgactcaccttcctcttttgagatttcaaatttcat tattaacctctggaacgaccttaaaaaaagacatagagattttgcagatgccattccagataaattaaacagaaataggg taacaaaaacattttgttcaattgatcctatgcaatgttttcatgagcttattgttcatcccctaaaatcagtgaaaata tcaaaaaatgcgcccttggaaacaatacatgccattgtttcgcatgataaatcacttttggaagaaacaactggaaatgg tttggatgtatttgatattgcgattttaagtgataaaccagcaaagtttaacctatttcagaattataaaccattgaaaa aacgaatatggtatctttggtacgcatcagtacatggctcaaacgctattgttaaagatctcctacatcaaggggccact gacgattgtggtaaatgtgaaccaagtatgctagatgaatgtaaaagaattaacgcagttttcttgaaaaatgcatcttc tgctaagacacccgaaaagtttgaattaagaagacagatgacatgtgagtcggctctttcagtggctgtaaaacaagggc attttgaagtgcacaaaatcgataattcagaaaatcagataccgaaggcatacaaaatcaggataaaacaggaaccaaag caaacaaacaaaaacctctactacatgaaaagaagcgaactcccgatatgggaagatgaagggaaacttcgttcagatga tgtgagatgggctctggagagttttaactgtggtattaaagaatactttgatgatacatttcttcagtttcatgcagatc tatatcagaatattgtacatataagaggtagatgttgtcaaaagtgcagtaaaaagaaacaagttgctgactggtgtagt ctatgcagtaaatggcgcgatgcaattcttgcaaaacacagatttcgaaattctatgatgggaacattcaattggaaaaa tatcgattcaacaaaatggccgtcagatgtagaggaagttcagaaggtattcctcccgtcctggtacaaagggaagctgg acacaacagacctgtcctcttgtttgagtatcatggctaactgcacattgtttaacaaccgcaagaaactactggacatt agagatataagaaacaatatttcccatggcgggatgtnggtgagttttcattgccaagggatgtggcgctcaatatatga tccatgggttttgggccaaccgtcttccttctttacatcccatgaggaattctttggacgagtatgggtgaaacaaaaaa tacgagaaagattaaaacagaacacgagtggagtgattttggtagcaggattaggatatggaaaatcagctcttattgca gattttataagacagtacgacgacaacaccaacctgccgatgattggataccatgtttgccaatataattcacggtctcc cttcggtgtttctaatttcatcttcaatttatatggaggtcttcggaaaagatacacagatttcatgaaggcaattcctg aaaaatggaaagataacaaggaaatgaaaacattttgcacctttgatccgtttcagtgctttcaagaacttattgttcat ccgttgacatcaacaagcccaaccaaacgctctcttttcgttattgatgcaattgatgaatgtcacgagtcagctcttgg agtgaatacaatttcagttccagagctgttgtttaagcaatatagggttctccagccttttgttacatttttcatgactt caaggaataactctctcctgctatcacattttcgaacgtacgataagatacatgtctttccaaatgatgaagaaaatatt aaagatctgaaactttttcttcaaagtaagaccagatgtactgaacgctatatcgatagaatagtcacagaggcaagtaa taattttttgatcttgagatactaccttttcgacatcgatgaaaaatgtacatttacatggggtaaaaaaattagaacaa tttatgaaatttacgattttgaattcttacgacgttatggaaatgatttttctagaaaatatcgaattgatcgcttgttt tttgaaattatatgctctcagctatttgaagattcaattaatgtaagcatagtgagaaagattttgcattattcaagtgc ggttcctgacgaagatgaattcgaagacatgatgcataggctgacacctaatcttatccgtatatttgatgataatgttc ttccgtttcattcttcactcttggaatggttaaaatccgacgagaatgtaaaatttaaagtgaacatccggcgtggtcat tatctttggacgcaatacttacatgataagcttaaggtgaaatcagcgaagccgctcaaacatacagatagtcaatcgat atttcggccatatgcattagctcttcatgtcattaatgccggaaatgaanctatagttaattatctccttaaacaaggca tagttgacgaatgtagaaaatgtagtttggagcaggttagtgaaaatgatggactttacgcagctttcttgaaaaatgga actaatgctacaaaactgatttcaatttctcagcttactgaatttagaagacattttgcatgcgagtcatcgctctcggt agcggtaaaacgcggacataatgcagtggtaagaactttacttttgtttggttccaaatgtctggagtttaaagatgcct ttgggtttacacctcttgccgcggctatctataacagacaagattcaatcactgaactactattgcaatttaaagcaaat gtgaactttgttatcaaatctacagtcaatccaacgaagatacggttttttaactcatatctacgcttcccgcttgaaaa aagttggagttctctgaatatttatgatggagccacaattttacatttactctctttaaggccaacatgtttttcagtac ttttgatgagaaaattattgcaaaaaagtcagagagagaattatcctatagatctagacatgaaagataaccatggctat tcacctttatactacgcaatttgtcacccagatgctgataattttgatgcaaatctttacgacattatacatacaaaatc tcacacagtggtatttgttctgataaaagcttcaagatattctacattctcatattttttcttaaaacaattaggaattt gtgagaagaaaactgaaatttcaaaattggttgtgaagtcaaggtacagggaaaaattctgtaaattgaaatcaaaattt cctagaactaaagattttaccgtaatttcagagcaaatactaaagaataattttcttgattctgtatttcatattgaagc aaaagacgatgtttcaactgatggaacatatctcaaattctatcgaattctgaacagaaattcaattcctaattttagag aaatgaatgttgttcatggactacccaaagaggaatactatatatatttgagaggtaacaaattcggtgaaaatgaacct accgtacttttcaaaccatga |
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Protein
| Protein ID | pfu_aug2.0_1255.1_18212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1255.1_18212.t1 MMGAFNWKNIDSTKWPSDVEEVQKAFLPSRHKGKLDTTDLSSCLSIMANCTLFNNRKKLLAIRDIRNNISHGRMSISVTE KQEYIGKILSFLKKDNLKTFPSVRKAIKHVTLLETLSIKDIHENDLIEEIERNRIEERLNARRGIYYYVNTCATSSILMS LIVLFACFISQWSRNNVSEESPWIPGRPSSFISSHDDFVGREWLKEKIQENLIQSRNGVILVAEPGFGKSAFVANFIKTY DNENLPLLGYHICRHDSPSSFEISNFIINLWNDLKKRHRDFADAIPDKLNRNRVTKTFCSIDPMQCFHELIVHPLKSVKI SKNAPLETIHAIVSHDKSLLEETTGNGLDVFDIAILSDKPAKFNLFQNYKPLKKRIWYLWYASVHGSNAIVKDLLHQGAT DDCGKCEPSMLDECKRINAVFLKNASSAKTPEKFELRRQMTCESALSVAVKQGHFEVHKIDNSENQIPKAYKIRIKQEPK QTNKNLYYMKRSELPIWEDEGKLRSDDVRWALESFNCGIKEYFDDTFLQFHADLYQNIVHIRGRCCQKCSKKKQVADWCS LCSKWRDAILAKHRFRNSMMGTFNWKNIDSTKWPSDVEEVQKVFLPSWYKGKLDTTDLSSCLSIMANCTLFNNRKKLLDI RDIRNNISHGGMXVSFHCQGMWRSIYDPWVLGQPSSFFTSHEEFFGRVWVKQKIRERLKQNTSGVILVAGLGYGKSALIA DFIRQYDDNTNLPMIGYHVCQYNSRSPFGVSNFIFNLYGGLRKRYTDFMKAIPEKWKDNKEMKTFCTFDPFQCFQELIVH PLTSTSPTKRSLFVIDAIDECHESALGVNTISVPELLFKQYRVLQPFVTFFMTSRNNSLLLSHFRTYDKIHVFPNDEENI KDLKLFLQSKTRCTERYIDRIVTEASNNFLILRYYLFDIDEKCTFTWGKKIRTIYEIYDFEFLRRYGNDFSRKYRIDRLF FEIICSQLFEDSINVSIVRKILHYSSAVPDEDEFEDMMHRLTPNLIRIFDDNVLPFHSSLLEWLKSDENVKFKVNIRRGH YLWTQYLHDKLKVKSAKPLKHTDSQSIFRPYALALHVINAGNEXIVNYLLKQGIVDECRKCSLEQVSENDGLYAAFLKNG TNATKLISISQLTEFRRHFACESSLSVAVKRGHNAVVRTLLLFGSKCLEFKDAFGFTPLAAAIYNRQDSITELLLQFKAN VNFVIKSTVNPTKIRFFNSYLRFPLEKSWSSLNIYDGATILHLLSLRPTCFSVLLMRKLLQKSQRENYPIDLDMKDNHGY SPLYYAICHPDADNFDANLYDIIHTKSHTVVFVLIKASRYSTFSYFFLKQLGICEKKTEISKLVVKSRYREKFCKLKSKF PRTKDFTVISEQILKNNFLDSVFHIEAKDDVSTDGTYLKFYRILNRNSIPNFREMNVVHGLPKEEYYIYLRGNKFGENEP TVLFKP |
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