Gene
| Gene Model ID | pfu_aug2.0_1255.1_18218 |
|---|---|
| Locus | scaffold1255.1 : 142950 ... 147205 : - |
| To GenomeBrowser | scaffold1255.1:142950..147205 |
| Genes list of scaffold | scaffold1255.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trna methyltransferase 112 homolog | GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1255.1_18218.t1 | 1 | 1 | Trm112p | 6 | 69 | 2.1e-11 | 44.0 | 1.7e-15 | 2.5e-11 | 43.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1255.1_18218.t1 | gi|676424222|ref|XP_009044217.1| | hypothetical protein LOTGIDRAFT_205589 [Lottia gigantea] | 2.0e-30 |
| pfu_aug2.0_1255.1_18218.t1 | gi|746850674|ref|XP_011055827.1| | PREDICTED: multifunctional methyltransferase subunit TRM112-like protein isoform X1 [Acromyrmex echinatior] | 5.0e-29 |
| pfu_aug2.0_1255.1_18218.t1 | gi|260790207|ref|XP_002590135.1| | hypothetical protein BRAFLDRAFT_83415 [Branchiostoma floridae] | 6.0e-29 |
| pfu_aug2.0_1255.1_18218.t1 | gi|746850676|ref|XP_011055828.1| | PREDICTED: multifunctional methyltransferase subunit TRM112-like protein isoform X2 [Acromyrmex echinatior] | 6.0e-29 |
| pfu_aug2.0_1255.1_18218.t1 | gi|91079885|ref|XP_967890.1| | PREDICTED: tRNA methyltransferase 112 homolog [Tribolium castaneum] | 7.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_1255.1_18218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1255.1_18218.t1 atgttacctaagatagactggtcagctcttattaaggcagctaaagatgtagggcatggagatggtttaccagaggcagt cattgagaatccagaaagtaatgaagaattccttaaggctgcacataatgctctcatgcaggttgaggtgattgagggaa agttagtatgtccagaatcacagagagagttccctatcaataacggaatacccaacatgttactgaacgaggacgaggtg tga |
|
Protein
| Protein ID | pfu_aug2.0_1255.1_18218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1255.1_18218.t1 MLPKIDWSALIKAAKDVGHGDGLPEAVIENPESNEEFLKAAHNALMQVEVIEGKLVCPESQREFPINNGIPNMLLNEDEV |
|