Gene
| Gene Model ID | pfu_aug2.0_1255.1_18221 |
|---|---|
| Locus | scaffold1255.1 : 167422 ... 176192 : - |
| To GenomeBrowser | scaffold1255.1:167422..176192 |
| Genes list of scaffold | scaffold1255.1 |
| Synonym | pfu_aug1.0_7936.1_38666 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1255.1_18221.t1 | 2 | 1 | Beta_helix | 3 | 77 | 1.4e-11 | 44.3 | 2.8e-11 | 2.1e-07 | 30.8 |
| pfu_aug2.0_1255.1_18221.t1 | 2 | 1 | NosD | 8 | 129 | 2.3e-11 | 43.2 | 5.9e-13 | 4.4e-09 | 35.8 |
| pfu_aug2.0_1255.1_18221.t1 | 2 | 2 | Beta_helix | 76 | 156 | 1.4e-11 | 44.3 | 3.2e-08 | 0.00024 | 20.9 |
| pfu_aug2.0_1255.1_18221.t1 | 2 | 2 | NosD | 77 | 158 | 2.3e-11 | 43.2 | 3.3e-08 | 0.00024 | 20.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1255.1_18221.t1 | gi|291239670|ref|XP_002739745.1| | PREDICTED: F-box only protein 10-like [Saccoglossus kowalevskii] | 2.0e-23 |
| pfu_aug2.0_1255.1_18221.t1 | gi|694844534|ref|XP_009463191.1| | PREDICTED: F-box only protein 10 [Nipponia nippon] | 1.0e-21 |
| pfu_aug2.0_1255.1_18221.t1 | gi|697840776|ref|XP_009640747.1| | PREDICTED: F-box only protein 10 [Egretta garzetta] | 4.0e-21 |
| pfu_aug2.0_1255.1_18221.t1 | gi|695146902|ref|XP_009500914.1| | PREDICTED: F-box only protein 10-like [Phalacrocorax carbo] | 5.0e-21 |
| pfu_aug2.0_1255.1_18221.t1 | gi|697012289|ref|XP_009572610.1| | PREDICTED: F-box only protein 10, partial [Fulmarus glacialis] | 9.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_1255.1_18221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1255.1_18221.t1 gtcgaggtgtgaccttgaagtttggtgatgaggtggcgttgttttgtaatgctatccacggtaaccgtggcaacggtatc cacatggatcaggatttcagtgtccttgtcaaggacaacagtgtgacctgtaatgctggggacggcatgaacacttcagg tcaaggacaggtgcaaattcagggtaatgggatttttgacaatcgtgatcatggcatattggccagaaatagcgctacaa tcacagaaaatgatgtcacgggaaatcaaagatgtgcaattaaactggaaggcaatgtctttacagaggttagaaataac cgactacagtccaagaacgataaggctttatcattgtccagtgttcataaaggcactgtatgtgataatgttatgtgtac tgctaagacaacggaatccggcatctatacctcaaaggactcgacctgtagtgtccaggataatgaggtcgttaccatgg aaacaaatacaacaaatacttgtaacagaaaggcccctagaaatgggagaaaaacaatcaaccagatgtttgacatgtgg gatgagaaaatcccacccttggggtatggtctctggtcagggaacttggcaagcctcattccctga |
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Protein
| Protein ID | pfu_aug2.0_1255.1_18221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1255.1_18221.t1 RGVTLKFGDEVALFCNAIHGNRGNGIHMDQDFSVLVKDNSVTCNAGDGMNTSGQGQVQIQGNGIFDNRDHGILARNSATI TENDVTGNQRCAIKLEGNVFTEVRNNRLQSKNDKALSLSSVHKGTVCDNVMCTAKTTESGIYTSKDSTCSVQDNEVVTME TNTTNTCNRKAPRNGRKTINQMFDMWDEKIPPLGYGLWSGNLASLIP |
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