Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1258.1_28161
Locus scaffold1258.1 : 28846 ... 34606 : +
To GenomeBrowser scaffold1258.1:28846..34606
Genes list of scaffold scaffold1258.1
Synonym pfu_aug1.0_175952.1_42885

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1258.1_28161.t1 1 1 DUF1077 49 117 2.1e-28 98.1 1.9e-32 2.8e-28 97.7

Transcript
Transcript IDpfu_aug2.0_1258.1_28161.t1
Definition-
>pfu_aug2.0_1258.1_28161.t1
atgttcgtgtggcgttcggcacatatgtgttacgttcaatgcgtttctgctgcgccaaagtcggacagacagttggtacc
tgtcaacacagatctcgcgcggcctgtaggctttgatgataatctgaacaaatctattagtgataaaacaggagaagatg
ccgaccaaaagctgattgataagagatcatgggacatagccttgggtccattgaagcagattccgatgaatttcttcatc
atgtggatggcggggaattccatttctattttcccaattatgatggtcggaatgatgttctttagaccaatacaggctct
cttggcagcacaaaacacgtttcctataatatttggagaaaccacacctgccatctgtgacctcantttattcaaataa

Protein
Protein IDpfu_aug2.0_1258.1_28161.t1
Definition-
>pfu_aug2.0_1258.1_28161.t1
MFVWRSAHMCYVQCVSAAPKSDRQLVPVNTDLARPVGFDDNLNKSISDKTGEDADQKLIDKRSWDIALGPLKQIPMNFFI
MWMAGNSISIFPIMMVGMMFFRPIQALLAAQNTFPIIFGETTPAICDLXLFK

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