Gene
| Gene Model ID | pfu_aug2.0_1258.1_28165 |
|---|---|
| Locus | scaffold1258.1 : 138856 ... 172211 : - |
| To GenomeBrowser | scaffold1258.1:138856..172211 |
| Genes list of scaffold | scaffold1258.1 |
| Synonym | pfu_aug1.0_4751.1_59594 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1258.1_28165.t1 | 4 | 1 | YgaB | 87 | 116 | 4.8e-06 | 26.7 | 0.00044 | 1.6 | 9.0 |
| pfu_aug2.0_1258.1_28165.t1 | 4 | 2 | YgaB | 784 | 822 | 4.8e-06 | 26.7 | 0.034 | 130.0 | 2.9 |
| pfu_aug2.0_1258.1_28165.t1 | 4 | 3 | YgaB | 1251 | 1280 | 4.8e-06 | 26.7 | 0.0077 | 29.0 | 5.0 |
| pfu_aug2.0_1258.1_28165.t1 | 4 | 4 | YgaB | 1451 | 1480 | 4.8e-06 | 26.7 | 0.0077 | 29.0 | 5.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1258.1_28165.t1 | gi|749159913|ref|XP_011131585.1| | putative thrombospondin type 1 domain protein [Gregarina niphandrodes] | 1.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_1258.1_28165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1258.1_28165.t1 atgagaggttgtgctatctacattttgttttcccttttgtccatatttggaaaatgggaattggccgtaaatggaaaaac tcatgatgaatcggattacgaagttggttcagatgacgatacggagaaaccaaacaaatcaaaagtaaacgtaaaacttg catcaactgtttcaaaagctattgctgaaatcggtaaaagctttcattatggtatgattggagaagtcaataaaataaca aagctagatgacgtcagagttgccttacaagccgatctaaatgacattcaacattcaattgaagccatggacaaagagtt gaaaaaactcttcgatacttttagcgaagaattgatgacatctttagatctacatggactcctcacccagtacggtcaaa ttgtcagagatctgaaattttactatcttgtgctgattgaaaagagtgaaacaacaagcgctacgcaaaacctggatatg caagagaaagaagctttggcaaggagtcttatcaaaccaactgcgcttcgtagaagtctagaatttttgagctacttgtt ccttggtagacaggacgtttccttgatttcacacaagtccctgttgtttctcacaatggataaacatcgctcacagctct gttctaccatgtacaagaagacattggatgatgcatacaagcagctagcgttattagagtttcagggctacgccgtatgg atgcatgcattgcagctacttcagctcgacacatttttcgttgtcctgcgctataacaaaactgtcaccaaacacaaaga ctttttagattcgaacacttgtcaggtagcgatcagcaattctgtaaacctcaagaattgtacaaatggttactatgtgt actctgggatggacgaggacgtcgtatgtgaagacaactactaccttacgagcaagtcgatttcgctctatgtgcacaat gtagtcagggtgtcgagtgagatgtctccaacaacacactatccctcacttttccaagaattgaaaaaaatgcttacttt gttatccgataggtcatcagccagagagattattggactcccaaatgtctacccaacatatggaaataacacacaggctt ggtcgccagcacctgatgatataaacaacccacagttcattgtggtaagatttaaggaccctctttttgtggaagaaatc aacatatatgaaacattccatggtggtgcagtatggaaaattgaaggattgaatggcgatggaaaatggaaagtattgat ggagaaaacaaaacaaagcctacaggatatcgagaaagctaatatatataatgcgactatcaatattgattggagcacat ctcagctgaaagtaagcatcgattgtacaaaatctggcaaagctattcaaattgatggtattcggatgactggacgacct gtaaaaggaacatgttcttggtatgattccctttcttgtactccctgtggctgtgattctaccggttcatattcaacaac atgtagctctgatggtcagtgtagatgtaaaacaggatacaaagggaaaagatgtttaagccgaaaatgtgtcatcggac aatggtcagcctggtcaaactgtgaatgtggaccagggaaaaccaaagaacgaaccagacagatcacccaaagtcggtac ggagccggaaaagcgtgcgagaaaaccaaagaaacagtggactgtaatcttgtttgtcaatgtggtgtaggggagcgcgg tgattactgcgaacacaaagattgtctgatgtcaaactggggcccttggtcggattgtcccccacaagaaacttatacta acttccctttcatgagtagcaactttccgtcttctcctactcttgatggttttgtttctcagctgatacggtacgccagg gcatgctccaaatatggcgatgtcatcgttagagccagacggcttgcaaaatttttcaacatggcaggattcacaacctt tttgttgttctacatattgaccttatgttctgtgaatggagtgaatcatgatcaagacgcatcagattacaaagtcggaa aacatgatgcaacgggaaaagagagtaaaccttataaagtatctgccttaacaattacaaaaggaatagctgaagtcggt aaaacattccattacggtatgattggagaagtcaacaaggtaaccaagatgatgactgatgatggtgaagtagaaaagat gggatttctcttaaagaaatttcctcgtctgaaacacattccaaaactagcaggagcatttggtgctgtcggtaccttgt tgtccgtggcgttttcattcgttccaacgggcgattcagcggaattggaatatatgaagaaagcatttactgatatgaat aagaaattggacgaaattacagagtcgttaaaagaatctaaatctctgatacaagagtactctcagaaagcggcctatat acaatccgaaaatgacataaataaagcatacaacaaacttgaatggattgtttctagtttcatgaatgttacttgtacca cagaggccgattgcaaaacaaagaaaatgaagataatggataacaacaaggacgaattggacgtaagagatgatgttgaa gatatccttaatggggttctgtacgattcaatctttagtacatctcttttgactttgattgcggagaaaagcgaatgtta catcaagaaaattcagaatttccaaagtgctgttgcagcccttgccataaaaggcaattctgcagcaatgttatatgaca tggtgacaaaagacggttacgatatgaccgacgatgtcaggaggttccagaaactcatgtttgaccttgagaaaaagaca gaaggtatcatctacacttgttaccaaaacataaacagacatattgtctcagatgtcattgacctagataataaggcagc aggagctggaatcgctgacgcaaatgaaaatattttgaagtttctcgccataaagtatcactggattgatttctacgtag taacctgtgatgctgactccaatccattattctggacaaacgaaaatttccattctgaaatcaatgatagaagcgaatca gaaaataaggacacgaaaaacttcatcttaattggttcaaggaatcgcgtggaaaatgaagtcgaaaagaaagacagatt tcgaaagaaagtaaaaagtaccaagctgcgatacacgtcttggcttaaaaccaaatacgacgaggcgattgataatctgt taggcgttgtagagtacgacaagtatttacataatcaatttcgagccatcgcagtccttcccgactatgaggacgctttg ataggctacatagaccaagatggggctgtcgagcaattgtatcccaatgcctatgaagatatagcaaaaggcgatctgtt agtagctcaacaatgtagaaatgacgcgaactgcaaaacaagttatgaacccgtagctgtgatctccaatatacatagca caaatcaggatattgaggaatgctcaaacgcgtgtagttcacatggaacatgtttctttctgccgcatacaaaagtaatg agttgtagatgtgatgacgatcattacggagatgactgtagcttagacgtgtcatacatcaatatggcgttagatcttat tcagttaatagacatttcattcacactgcccagtttgtttgatgtttccagtcagcttaatgacgtccgtgtcaacttac aagccgatctgaacggggttcaacattccattgatgaaatggacatagaacttgataaaatctttaatgccttcagtaaa gatttgatgacatctctcgaccttcacggacttcttacacagtatggtcaggtcgtacgagatatcaaatattactatca tgttttgattggaaagaatgagacaaagcatgtgaagatgaatttaccttactaccccattgacacacaacaaagtcttt atacaaaagagaaggaggcattggcaagacatctaatcaaaccaacagagctgcgacgaagccttgattttctgagctan ggacgctttgataggctacatagaccaagatggggctgtcgagcaattgatattgaggaatgctcaaacgcgtgtagttc acatggaacatgtttctttctgccgcatacaaaagtaatgagttgtagatgtgatgacgatcattacggagatgactgta gcttagacgtgtcatacatcaatatggcgttagatcttattcagttaatagacatttcattcacactgcccagtttgttt gatgtttccagtcagcttaatgacgtccgtgtcaacttacaagccgatctgaacggggttcaacattccattgatgaaat ggacatagaacttgataaaatctttaatgccttcagtaaagatttgatgacatctctcgaccttcacggacttcttacac agtatggtcaggtcgtacgagatatcaaatattactatcatgttttgattggaaagaatgagacaaagcatgtgaagatg aatttaccttactaccccattgacacacaacaaagtctttatacaaaagagaaggaggcattggcaagacatctaatcaa accaacagagctgcgacgaagccttgattttctgagctacctatttttcggaagagaggacatttcccttatctctcata agccgttgttgtttcttaccatggataagcatcgatcaaaagtatgttcttacgagtacaaaaaggtcttggatgacaca tacaagcagcttacaatattggaatttcagggatacactgtattgttgcacgctttgcgcatggctaagttggacaactt cttcgttgtccctcgctataaggatgttgtcaggaaacacaatgagtttttcgataggaccacttgtcaggttgcgatca acaactcggtgaacttcaagaattgctcaggtggctactttgtgtactcgggaatgatggagaatgtaaactgcgcagtc aatttttatttaaacaatcaatcaatttcactctatgtggaaaaggtgatccaagtatccagtgaattatctcgaactga gtcatcagcgaaggagataataggacgcccgaatgtctatccttcgtatgggaataacacacaggcttggtccccagcac atgacgaaacagacgagccacaattcatagaggtatcttttaaggatccacttttcgtagaagaaattaatatttatgaa acattccacggtggcgcagtgtggaaaattgaaggattgaatggcgatggaaaatggaaagttctgatggagaagtcaaa acaaagcctacaggatattaaaaaggcaaatatattcaaagaaagtgtaaagactgactggagcacatctcaactcaaag ttcatatagattgttccaaatcgggtaaagcagtccagattgatgccatacagctaacaggaagaccagttaaaggtaca tgttcctggtatgattccctttcttgtactccctgtggctgtgactctactggttcatattcaacaacgtgtgacaataa tggtcagtgtagatgtaaagcaggttacaaggggaagagatgtttaagcagggattgtgccatcggacaatggtcagcct ggtcggactgtgaatgtggtccagggaaaactaaaacacgaaacagacagatcacccaaagtcgttacggagccggaaaa gcatgcgaggaaaccaaggaaacagtggactgtaatctcgtatgcaagtgtgggattggagaacgtggagattattgtca acataaggattgcttgatgtcagaatggggaccttggagtgcttgtcctaaacaaatacttagtcctaattgtcatggag atgaaaaacggtatgccaagcaggagcgttataggagcaaaactcgagagaggcaaaataacggcgccgcgtgtccacct aacaagcagacgaaaaattgtccatcagcaaaatgcaagctacaaagcatatacataggcccataa |
|
Protein
| Protein ID | pfu_aug2.0_1258.1_28165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1258.1_28165.t1 MRGCAIYILFSLLSIFGKWELAVNGKTHDESDYEVGSDDDTEKPNKSKVNVKLASTVSKAIAEIGKSFHYGMIGEVNKIT KLDDVRVALQADLNDIQHSIEAMDKELKKLFDTFSEELMTSLDLHGLLTQYGQIVRDLKFYYLVLIEKSETTSATQNLDM QEKEALARSLIKPTALRRSLEFLSYLFLGRQDVSLISHKSLLFLTMDKHRSQLCSTMYKKTLDDAYKQLALLEFQGYAVW MHALQLLQLDTFFVVLRYNKTVTKHKDFLDSNTCQVAISNSVNLKNCTNGYYVYSGMDEDVVCEDNYYLTSKSISLYVHN VVRVSSEMSPTTHYPSLFQELKKMLTLLSDRSSAREIIGLPNVYPTYGNNTQAWSPAPDDINNPQFIVVRFKDPLFVEEI NIYETFHGGAVWKIEGLNGDGKWKVLMEKTKQSLQDIEKANIYNATINIDWSTSQLKVSIDCTKSGKAIQIDGIRMTGRP VKGTCSWYDSLSCTPCGCDSTGSYSTTCSSDGQCRCKTGYKGKRCLSRKCVIGQWSAWSNCECGPGKTKERTRQITQSRY GAGKACEKTKETVDCNLVCQCGVGERGDYCEHKDCLMSNWGPWSDCPPQETYTNFPFMSSNFPSSPTLDGFVSQLIRYAR ACSKYGDVIVRARRLAKFFNMAGFTTFLLFYILTLCSVNGVNHDQDASDYKVGKHDATGKESKPYKVSALTITKGIAEVG KTFHYGMIGEVNKVTKMMTDDGEVEKMGFLLKKFPRLKHIPKLAGAFGAVGTLLSVAFSFVPTGDSAELEYMKKAFTDMN KKLDEITESLKESKSLIQEYSQKAAYIQSENDINKAYNKLEWIVSSFMNVTCTTEADCKTKKMKIMDNNKDELDVRDDVE DILNGVLYDSIFSTSLLTLIAEKSECYIKKIQNFQSAVAALAIKGNSAAMLYDMVTKDGYDMTDDVRRFQKLMFDLEKKT EGIIYTCYQNINRHIVSDVIDLDNKAAGAGIADANENILKFLAIKYHWIDFYVVTCDADSNPLFWTNENFHSEINDRSES ENKDTKNFILIGSRNRVENEVEKKDRFRKKVKSTKLRYTSWLKTKYDEAIDNLLGVVEYDKYLHNQFRAIAVLPDYEDAL IGYIDQDGAVEQLYPNAYEDIAKGDLLVAQQCRNDANCKTSYEPVAVISNIHSTNQDIEECSNACSSHGTCFFLPHTKVM SCRCDDDHYGDDCSLDVSYINMALDLIQLIDISFTLPSLFDVSSQLNDVRVNLQADLNGVQHSIDEMDIELDKIFNAFSK DLMTSLDLHGLLTQYGQVVRDIKYYYHVLIGKNETKHVKMNLPYYPIDTQQSLYTKEKEALARHLIKPTELRRSLDFLSX GRFDRLHRPRWGCRAIDIEECSNACSSHGTCFFLPHTKVMSCRCDDDHYGDDCSLDVSYINMALDLIQLIDISFTLPSLF DVSSQLNDVRVNLQADLNGVQHSIDEMDIELDKIFNAFSKDLMTSLDLHGLLTQYGQVVRDIKYYYHVLIGKNETKHVKM NLPYYPIDTQQSLYTKEKEALARHLIKPTELRRSLDFLSYLFFGREDISLISHKPLLFLTMDKHRSKVCSYEYKKVLDDT YKQLTILEFQGYTVLLHALRMAKLDNFFVVPRYKDVVRKHNEFFDRTTCQVAINNSVNFKNCSGGYFVYSGMMENVNCAV NFYLNNQSISLYVEKVIQVSSELSRTESSAKEIIGRPNVYPSYGNNTQAWSPAHDETDEPQFIEVSFKDPLFVEEINIYE TFHGGAVWKIEGLNGDGKWKVLMEKSKQSLQDIKKANIFKESVKTDWSTSQLKVHIDCSKSGKAVQIDAIQLTGRPVKGT CSWYDSLSCTPCGCDSTGSYSTTCDNNGQCRCKAGYKGKRCLSRDCAIGQWSAWSDCECGPGKTKTRNRQITQSRYGAGK ACEETKETVDCNLVCKCGIGERGDYCQHKDCLMSEWGPWSACPKQILSPNCHGDEKRYAKQERYRSKTRERQNNGAACPP NKQTKNCPSAKCKLQSIYIGP |
|